nvelden / geneviewerLinks
An R package designed for drawing gene arrow maps
☆87Updated last month
Alternatives and similar repositories for geneviewer
Users that are interested in geneviewer are comparing it to the libraries listed below
Sorting:
- ☆75Updated this week
- Metagenomics-related extended functionalities to samtools☆21Updated 2 years ago
- BEAV: Bacterial Element Annotation reVamped☆67Updated last week
- PATO is a R package designed to analyze pangenomes (set of genomes) intra or inter species.☆61Updated last year
- CLI tool to annotate genes with KOfam☆86Updated 2 years ago
- Bioinformatics tool for Locus Visualisation☆113Updated 3 months ago
- gutSMASH☆55Updated 8 months ago
- A toolkit for prokaryotic comparative genomics☆50Updated 7 months ago
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆62Updated this week
- Python code for versatile Functional Ontology Assignments for Metagenomes searching via Hidden Markov Model (HMM) with environmental focu…☆59Updated 4 months ago
- A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category☆71Updated 3 months ago
- ARG normalization by mapping to the ARO ontology.☆58Updated last month
- Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in Septermber☆63Updated 11 months ago
- Amplicon sequencing pipelines suitable for SSU (16S, 18S), LSU (23S, 28S) and ITS.☆54Updated 2 months ago
- Bioinformatics Tools☆89Updated this week
- FastOMA is a scalable software package to infer orthology relationship.☆79Updated last week
- SAMSA pipeline, version 2.0. An open-source metatranscriptomics pipeline for analyzing microbiome data, built around DIAMOND and customi…☆56Updated last year
- (Meta-)genome screening for functional and natural product gene sequences☆92Updated last month
- A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing☆70Updated 4 years ago
- Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.☆104Updated 5 months ago
- Automatic Assembly For The Fungi☆25Updated this week
- GenoVi, an automated customizable circular genome visualizer for bacteria and archaea☆96Updated 2 years ago
- HoCoRT - Remove specific organisms from sequencing reads☆17Updated 7 months ago
- Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes☆88Updated 3 months ago
- CroCoDeEL is a tool that detects cross-sample contamination in shotgun metagenomic data☆24Updated 3 weeks ago
- MuDoGeR makes the recovery of genomes from prokaryotes, viruses, and eukaryotes from metagenomes easy.☆88Updated last year
- The SpeciesPrimer pipeline is intended to help researchers finding specific primer pairs for the detection and quantification of bacteria…☆45Updated last year
- a multiple sequence alignment-trimming algorithm for accurate phylogenomic inference☆79Updated 3 weeks ago
- All of my various bioinformatic scripts fit for public consumption (loosely defining "fit")☆77Updated 2 years ago
- A tool to raise the quality of viral genomes assembled from short-read metagenomes via resolving and joining of contigs fragmented during…☆74Updated 2 months ago