A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data
☆101Aug 11, 2025Updated 10 months ago
Alternatives and similar repositories for bigslice
Users that are interested in bigslice are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Similarity networks of biosynthetic gene clusters☆172Apr 1, 2026Updated 3 months ago
- ☆34Jan 27, 2026Updated 5 months ago
- antiSMASH☆257Jun 26, 2026Updated last week
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆41Sep 28, 2025Updated 9 months ago
- Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)☆55May 16, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A workflow and scripts for large-scale antiSMASH analyses☆51Apr 3, 2025Updated last year
- Bioinformatic Tools for study Evolution of metabolic diversity☆41Feb 27, 2024Updated 2 years ago
- GEne Cluster prediction with COnditional random fields.☆84Mar 10, 2026Updated 3 months ago
- BGC Detection and Classification Using Deep Learning☆158Nov 11, 2023Updated 2 years ago
- ☆18Mar 20, 2025Updated last year
- Find clustered hits from a BLAST search☆144Jan 16, 2026Updated 5 months ago
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆30Mar 9, 2026Updated 3 months ago
- skDER & CiDDER: efficient & high-resolution dereplication of microbial genomes.☆60May 24, 2026Updated last month
- A hybrid assembly and MAG recovery pipeline (and more!)☆109Updated this week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆20Mar 29, 2022Updated 4 years ago
- Predict AMPs in (meta)genomes and peptides☆96Nov 24, 2025Updated 7 months ago
- scripts for predicting natural product activity from biosynthetic gene cluster sequences☆27Mar 16, 2026Updated 3 months ago
- scripts for estimating bacteria replication rates based on population genome copy number variation☆75Dec 28, 2019Updated 6 years ago
- This is a repository for CAMPER.☆17Mar 18, 2024Updated 2 years ago
- Gene cluster comparison figure generator☆644Dec 22, 2025Updated 6 months ago
- A scalable high-throughput metabolic and biogeochemical functional trait profiler☆227Mar 24, 2026Updated 3 months ago
- ☆51Jun 26, 2026Updated last week
- ☆47Jun 27, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- (Meta-)genome screening for functional and natural product gene sequences☆114Jun 27, 2026Updated last week
- ☆19Dec 7, 2020Updated 5 years ago
- Pipeline for metabolic annotation of microbial genomes☆150Mar 20, 2025Updated last year
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆72May 23, 2026Updated last month
- Python package to study microbial communities using metabolic modeling.☆133Jun 22, 2026Updated last week
- Bioinformatics program inStrain☆190Mar 12, 2026Updated 3 months ago
- BiG-MEx implementation as Docker images and R packages☆13Feb 9, 2022Updated 4 years ago
- geNomad: Identification of mobile genetic elements☆318Mar 29, 2026Updated 3 months ago
- Classify metagenomic contigs as eukaryotic or prokaryotic☆46Feb 17, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- lsaBGC - suite for pan-BGC-omics analysis☆23Nov 21, 2025Updated 7 months ago
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆656May 15, 2026Updated last month
- Systematic search of all known anti-phage systems.☆173May 5, 2026Updated last month
- Plot bacterial gene maps and genome comparison plots from command line with genoPlotR and GenomeDiagram☆13Mar 10, 2026Updated 3 months ago
- gutSMASH☆60Oct 3, 2025Updated 9 months ago
- A user-friendly workflow for phylogenomics☆230May 12, 2026Updated last month
- Tool for constructing phylogenies and summarizing metabolic characteristics based on curated and custom profile HMMs☆19Feb 5, 2022Updated 4 years ago