mdozmorov / TCGAsurvivalLinks
Scripts to analyze TCGA data
☆128Updated last year
Alternatives and similar repositories for TCGAsurvival
Users that are interested in TCGAsurvival are comparing it to the libraries listed below
Sorting:
- TCGA-Assembler 2☆77Updated 7 years ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆98Updated last year
- Cell types enrichment analysis☆205Updated last year
- ☆143Updated 7 years ago
- iCellR is an interactive R package designed to facilitate the analysis and visualization of high-throughput single-cell sequencing data. …☆127Updated last month
- Interactively analyze single cell genomic data☆185Updated 3 months ago
- Updated implementation of the GSEA-P R application for modern R distributions☆99Updated 4 years ago
- ☆62Updated 5 years ago
- Easily download publicly available GWAS summary statistics.☆77Updated 2 years ago
- Immunology-related bioinformatics data and tools☆76Updated last year
- Integrative pathway enrichment analysis of multivariate omics data☆117Updated 5 months ago
- ☆45Updated 6 years ago
- Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis inclu…☆16Updated 6 years ago
- Building classifiers using cancer transcriptomes across 33 different cancer-types☆122Updated 6 years ago
- Course material in notebook format for learning about single cell bioinformatics methods☆99Updated 9 years ago
- The package wrapping the book, for deployment via the Bioconductor build system.☆97Updated last year
- ☆114Updated 3 years ago
- CRC Subtyping Consortium☆13Updated 7 years ago
- ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method …☆84Updated 4 years ago
- Tools for manipulating annotated data matrices☆92Updated 4 years ago
- This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset☆154Updated 4 years ago
- AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-…☆106Updated 3 years ago
- ☆43Updated last month
- Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data☆107Updated 2 years ago
- Multi-Omics integration and VIsualization in Cancer Subtyping☆145Updated 4 years ago
- ☆59Updated 3 years ago
- TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages☆49Updated 2 years ago
- A Systematic and Dynamic Pipeline for Single-Cell RNA Sequencing Analysis☆112Updated 2 years ago
- Mouse cell atlas☆61Updated 5 years ago
- ☆33Updated 4 years ago