rli012 / GDCRNAToolsLinks
GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC
☆68Updated 2 years ago
Alternatives and similar repositories for GDCRNATools
Users that are interested in GDCRNATools are comparing it to the libraries listed below
Sorting:
- Create KEGG.db Package☆64Updated 2 years ago
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆52Updated 6 years ago
- RNA-seq data analysis practical☆62Updated 11 years ago
- Multiscale embedded gene co-expression network analysis☆57Updated 2 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆118Updated 6 months ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 7 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 4 years ago
- Transcriptomics Visualization R package.☆76Updated 9 months ago
- Bayesian network plot for the enrichment analysis results☆66Updated last year
- ☆44Updated 7 years ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆63Updated 4 years ago
- collection of notebooks with different cytoscape workflows☆50Updated 2 years ago
- documentation for trackViewer☆29Updated 6 years ago
- Scripts to recreate figures from the SC3 paper☆41Updated 8 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆45Updated 5 years ago
- Immunology-related bioinformatics data and tools☆76Updated last year
- Arabidopsis RNA_-seq downstream analysis shiny app☆30Updated 6 years ago
- Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for man…☆53Updated 7 years ago
- ☆30Updated 7 years ago
- ☆32Updated 8 years ago
- ATAC-seq snakemake pipeline☆88Updated 5 years ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆98Updated last year
- ☆50Updated 4 years ago
- Bioinformatics Workflows☆19Updated 5 years ago
- reproduce the functional enrichment analysis presented in GTEx paper using clusterProfiler/DOSE☆33Updated 4 years ago
- Genomic Identification of Significant Targets in Cancer (GISTIC), version 2☆53Updated 3 years ago
- ☆29Updated 6 years ago
- RNA-seq Quantification of Alternative Polyadenylation☆50Updated 6 months ago
- GLASS consortium☆42Updated 5 years ago
- my first R package just for testing☆43Updated 6 years ago