Alternatives and similar repositories for FG-Lab

Users that are interested in FG-Lab are comparing it to the libraries listed below

• Japrin / sscVis
  simpler single cell RNAseq data Visualization
  ☆10Updated 10 months ago
• rosedu1 / deconvSeq
  deconvolution for RNAseq and bisulfite sequencing
  ☆11Updated 5 years ago
• Waelchli-lab / Single-cell-atlas-of-the-human-brain-vasculature-accross-development-adulthood-and-disease
  Molecular atlas of the human brain vasculature accross development, adulthood and disease at the single-cell level
  ☆13Updated last year
• single-cell-genetics / singlecell_endodiff_paper
  Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression
  ☆15Updated last year
• compbioNJU / CellFunTopic
  Functional Annotation for Single-Cell Transcriptomics
  ☆11Updated last year
• Coolgenome / GastricCancer
  ☆12Updated last year
• 3254c / scSurv
  a deep generative model for single-cell survival analysis
  ☆13Updated last month
• zgyaru / anti-PD1_ESCC
  ☆17Updated 2 years ago
• MarioniLab / oor_design_reproducibility
  ☆16Updated 2 years ago
• data2intelligence / CytoSig_prediction
  Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts
  ☆14Updated 2 years ago
• NMikolajewicz / scPipeline
  Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports
  ☆11Updated 2 years ago
• secrierlab / EMT
  This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.
  ☆13Updated 2 years ago
• CyrilLagger / scDiffCom
  Difference in Intercellular Communication from scRNA-seq data
  ☆24Updated 3 months ago
• ZornLab / Single-cell-transcriptomics-reveals-a-signaling-roadmap-coordinating-endoderm-and-mesoderm-lineage
  Code and Data Availability for Single cell transcriptomics reveals a signaling roadmap coordinating endoderm and mesoderm lineage diversi…
  ☆10Updated 5 years ago
• lydiaMyr / ImmuCellAI-mouse
  ☆10Updated 7 months ago
• ventolab / Human-Uterus-Cell-Altas_UHCA
  UHCA
  ☆11Updated 11 months ago
• Vivianstats / scINSIGHT
  Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data
  ☆22Updated last year
• JinmiaoChenLab / FastIntegration
  FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis
  ☆23Updated last year
• drewvoigt10 / cellcuratoR
  sharing interactive single cell gene expression visualizations from Seurat
  ☆11Updated 2 years ago
• veltenlab / mitoClone
  ☆12Updated 4 years ago
• franklinhuanglab / scRNA-seq-Analysis-of-Prostate-Cancer-Samples
  Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…
  ☆25Updated 3 years ago
• powellgenomicslab / ascend
  Analysis of Single Cell Expression, Normalization and Differential expression
  ☆12Updated 5 years ago
• parveendabas / GBMatlas
  ☆18Updated 3 years ago
• Molecular-Neurogenetics / truster
  https://molecular-neurogenetics.github.io/truster/
  ☆11Updated 6 months ago
• dbrg77 / ISSAAC-seq
  ☆18Updated 2 years ago
• ChenWeiyan / LandSCENT
  Landscape Single Cell Entropy
  ☆21Updated 5 years ago
• soumelis-lab / ICELLNET
  ☆22Updated 6 months ago
• ati-lz / HCA_Benchmarking
  This repository contains HCA Benchmarking codes
  ☆26Updated 6 years ago
• multitalk / miRTalk
  Extracellular vesicle-derived miRNA-mediated cell-cell communication inference for single-cell transcriptomic data
  ☆17Updated 9 months ago
• gillislab / MetaMarkers
  Efficiently compute robust markers across single-cell datasets
  ☆11Updated 4 years ago