Alternatives and similar repositories for FG-Lab

Users that are interested in FG-Lab are comparing it to the libraries listed below

• compbioNJU / CellFunTopic
  Functional Annotation for Single-Cell Transcriptomics
  ☆11Updated last year
• Waelchli-lab / Single-cell-atlas-of-the-human-brain-vasculature-accross-development-adulthood-and-disease
  Molecular atlas of the human brain vasculature accross development, adulthood and disease at the single-cell level
  ☆13Updated last year
• Coolgenome / GastricCancer
  ☆12Updated last year
• NMikolajewicz / scPipeline
  Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports
  ☆11Updated 2 years ago
• rosedu1 / deconvSeq
  deconvolution for RNAseq and bisulfite sequencing
  ☆10Updated 5 years ago
• secrierlab / EMT
  This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.
  ☆13Updated 2 years ago
• franklinhuanglab / scRNA-seq-Analysis-of-Prostate-Cancer-Samples
  Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…
  ☆23Updated 3 years ago
• lydiaMyr / ImmuCellAI-mouse
  ☆10Updated 3 months ago
• drewvoigt10 / cellcuratoR
  sharing interactive single cell gene expression visualizations from Seurat
  ☆10Updated 2 years ago
• zgyaru / anti-PD1_ESCC
  ☆17Updated 2 years ago
• ati-lz / HCA_Benchmarking
  This repository contains HCA Benchmarking codes
  ☆26Updated 5 years ago
• data2intelligence / CytoSig_prediction
  Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts
  ☆13Updated 2 years ago
• veltenlab / mitoClone
  ☆12Updated 4 years ago
• single-cell-genetics / singlecell_endodiff_paper
  Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression
  ☆15Updated last year
• RebuffetLucas / Meta_NK_Project
  ☆10Updated last month
• showteeth / GEfetch2R
  GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools
  ☆36Updated 5 months ago
• soumelis-lab / ICELLNET
  ☆20Updated 2 months ago
• jgamache014 / snRNA-seq-workflow
  Human brain, >200,000 nuclei
  ☆24Updated 4 years ago
• dpeerlab / progressive-plasticity-crc-metastasis
  Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"
  ☆16Updated 9 months ago
• elo073 / 5loclung
  Custom codes accompanying single cell spatial transcriptomic study on the healthy human lung
  ☆12Updated last year
• crazyhottommy / scCustomize
  Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
  ☆16Updated 3 years ago
• multitalk / miRTalk
  Extracellular vesicle-derived miRNA-mediated cell-cell communication inference for single-cell transcriptomic data
  ☆15Updated 5 months ago
• aet21 / EpiSCORE
  Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles
  ☆33Updated 5 months ago
• dbrg77 / ISSAAC-seq
  ☆17Updated 2 years ago
• ludvigla / STUtility_web_site
  ☆15Updated 3 years ago
• JunyueCaoLab / EasySci
  Computational pipeline to process EasySci-RNA data.
  ☆21Updated last year
• powellgenomicslab / ascend
  Analysis of Single Cell Expression, Normalization and Differential expression
  ☆12Updated 5 years ago
• XSLiuLab / tumor-immunogenicity-score
  TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020
  ☆32Updated 4 years ago
• Molecular-Neurogenetics / truster
  https://molecular-neurogenetics.github.io/truster/
  ☆11Updated 2 months ago
• yizhak-lab-ccg / RNA_MUTECt_WMN
  ☆25Updated 3 years ago