Alternatives and similar repositories for tcga_example

Users that are interested in tcga_example are comparing it to the libraries listed below

• jmzeng1314 / scRNA_smart_seq2
  ☆311Updated 5 years ago
• jmzeng1314 / my_WGCNA
  ☆279Updated 5 years ago
• genecell / single-cell-papers-with-code
  Papers with code for single cell related papers
  ☆291Updated 2 years ago
• jmzeng1314 / 5years
  ☆245Updated 5 years ago
• Starlitnightly / single_cell_tutorial
  单细胞分析的中文pipeline
  ☆230Updated last year
• jmzeng1314 / R_bilibili
  ☆171Updated 6 years ago
• jmzeng1314 / scRNA_10X
  ☆94Updated 5 years ago
• jmzeng1314 / my-R
  a small collection for my R scripts
  ☆165Updated 6 years ago
• jmzeng1314 / NGS-pipeline
  By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline
  ☆327Updated 6 years ago
• WeiSong-bio / jmzeng1314-5years-summarize
  ☆118Updated 6 years ago
• jmzeng1314 / GEO
  ☆838Updated 2 years ago
• NBISweden / workshop-scRNAseq
  Single cell RNA sequencing analysis course
  ☆220Updated 3 months ago
• zhanghao-njmu / SCP
  An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.
  ☆536Updated last year
• IOBR / IOBR
  IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology.
  ☆252Updated 3 months ago
• hbctraining / scRNA-seq
  ☆572Updated 4 years ago
• junjunlab / scRNAtoolVis
  Useful functions to make your scRNA-seq plot more cool!
  ☆345Updated 2 months ago
• junjunlab / ClusterGVis
  One-step to Cluster and Visualize Gene Expression Matrix
  ☆314Updated this week
• ixxmu / mp_duty
  抓取网络文章到github issues保存
  ☆163Updated this week
• cellgeni / scRNA.seq.course
  Analysis of single cell RNA-seq data course
  ☆142Updated 2 years ago
• jmzeng1314 / methy_array
  ☆101Updated 5 years ago
• jinworks / CellChat
  R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
  ☆441Updated last month
• biotrainee / RiA2
  Source code for R in Action, Second Edition
  ☆29Updated 8 years ago
• NBISweden / excelerate-scRNAseq
  Single RNA-seq data analysis with R (Finland, May, 2019)
  ☆226Updated 3 years ago
• cellgeni / sceasy
  A package to help convert different single-cell data formats to each other
  ☆434Updated last year
• omnideconv / immunedeconv
  A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution method…
  ☆498Updated 3 weeks ago
• czbiohub-sf / scell_lung_adenocarcinoma
  This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset
  ☆150Updated 4 years ago
• aertslab / SCENIC
  SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.
  ☆463Updated last year
• jmzeng1314 / AnnoProbe
  ☆110Updated 2 years ago
• Teichlab / cellphonedb
  ☆356Updated 3 years ago
• quadbio / scRNAseq_analysis_vignette
  Tutorial for scRNA-seq data analysis beginners using R
  ☆210Updated 5 months ago