IARCbioinfo / awesome-TCGA
Curated list of TCGA resources
☆55Updated 7 years ago
Alternatives and similar repositories for awesome-TCGA:
Users that are interested in awesome-TCGA are comparing it to the libraries listed below
- ☆40Updated 7 years ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated last year
- Website for the precision medicine workshop☆45Updated 5 months ago
- This repository contains course materials from JAX-BD2K workshop.☆31Updated 5 years ago
- Statistical power studies for multi-omics experiments.☆31Updated 3 months ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 3 years ago
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆28Updated 9 years ago
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆20Updated 7 years ago
- Identify and correct invalid gene symbols☆58Updated 5 months ago
- Bioinformatics analysis scripts, workflows, general code examples☆53Updated 4 years ago
- Differential ATAC-seq toolkit☆27Updated last year
- documentation for trackViewer☆29Updated 5 years ago
- Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…☆44Updated 2 years ago
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 3 years ago
- snakemake workflow for post-processing scATACseq data☆20Updated 4 years ago
- a set of NGS pipelines☆24Updated 2 weeks ago
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 6 years ago
- Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data☆65Updated 5 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆35Updated 3 years ago
- Summer school course materials collection☆25Updated 6 years ago
- ☆44Updated 6 years ago
- Openbiox 翻译小组发起并维护的优秀 Workflow 翻译项目☆27Updated 5 years ago
- ☆12Updated 4 years ago
- An R for fast and flexible DNA methylation analysis☆32Updated 9 months ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- GLASS consortium☆39Updated 4 years ago
- ATAC-seq lab for BIOINF545☆25Updated 2 months ago
- ChIP-seq DC and QC Pipeline☆34Updated 4 years ago
- anor: an annotation and visualization system based on R and Shiny framework☆33Updated 5 years ago