Alternatives and similar repositories for myShiny

Users that are interested in myShiny are comparing it to the libraries listed below

• openbiox / Awesome-Bioinformatics-Workflow-Chinese
  Openbiox 翻译小组发起并维护的优秀 Workflow 翻译项目
  ☆27Updated 5 years ago
• quevedor2 / aneuploidy_score
  R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…
  ☆16Updated 4 years ago
• jmzeng1314 / BPscRNAseq
  ☆11Updated 6 years ago
• jmzeng1314 / IDmap
  ☆11Updated 6 years ago
• ShixiangWang / Variants2Neoantigen
  A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)
  ☆29Updated 5 years ago
• Xiang-HF-Zhang / Dichotomous-of-innate-immune-landscape
  Dichotomous of innate immune landscape
  ☆17Updated 5 years ago
• lagelab / quack
  Machine learning algorithm to predict biological pathway relationships based on functional genomics networks
  ☆20Updated 6 years ago
• icbi-lab / Immunophenogram
  ☆40Updated 7 years ago
• XSLiuLab / tumor-immunogenicity-score
  TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020
  ☆32Updated 3 years ago
• ShixiangWang / gcap
  GCAP (Gene-level Circular Amplicon Prediction) firstly implements extrachromosomal DNA detection from whole-exome-sequencing (WES) data a…
  ☆19Updated 5 months ago
• Gibbsdavidl / Immune-Subtype-Clustering
  This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".
  ☆18Updated 5 years ago
• foreverdream2 / dysfunction_interaction_test
  ☆29Updated 6 years ago
• paulgeeleher / pRRophetic
  R package
  ☆22Updated last year
• bioinformatist / CrossICC
  An Interactive Consensus Clustering framework for Cross-platform data analysis
  ☆14Updated 3 years ago
• gaospecial / ccgraph
  ☆11Updated 5 years ago
• CompEpigen / ezASCAT
  Conveniently perform ASCAT copy-number analysis from Tumor-Normal or Tumor only BAM files in R
  ☆11Updated 3 years ago
• jmzeng1314 / TF_map
  ☆12Updated 4 years ago
• lydiaMyr / ImmuCellAI
  ImmuCellAI (Immune Cell Abundance Identifier) is a tool to estimate the abundance of 24 immune cells from gene expression dataset includi…
  ☆15Updated last week
• andygxzeng / AMLHierarchies
  Analysis notebooks and data for AML hierarchies paper
  ☆16Updated last year
• dengchunyu / TIP
  The source code of web server TIP, including example data.
  ☆19Updated 6 years ago
• Niinleslie / MesKit
  A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations
  ☆36Updated 3 years ago
• gerstung-lab / PCAWG-11
  Code accompanying "The evolutionary history of 2,658 cancers", Nature 578, 122–128 (2020)
  ☆17Updated 5 years ago
• ShixiangWang / self-study
  My Self-Study Room: keep tidy and lightweight
  ☆31Updated last year
• lanagarmire / Granatum
  ☆20Updated 6 years ago
• ddhb / Workflow_of_ChIPSeq
  R code in workflow of chip-seq analysis
  ☆11Updated 5 years ago
• MahnoorNGondal / scRNA-seq-ICB-cohorts
  This repository contained single-cell RNA-seq datasets with ICB treated patients
  ☆10Updated 6 months ago
• reedliu / scRNA-codes
  ☆17Updated 5 years ago
• NKI-GCF / XenofilteR
  Filtering of PDX samples for mouse derived reads
  ☆28Updated 2 years ago
• crazyhottommy / scCustomize
  Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
  ☆16Updated 3 years ago
• jzsh2000 / seurat-shiny
  ☆19Updated last year