An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)
☆16Jul 3, 2012Updated 13 years ago
Alternatives and similar repositories for rna-seq-example
Users that are interested in rna-seq-example are comparing it to the libraries listed below
Sorting:
- A light weight shiny based web app to access TCGA data☆15Apr 29, 2015Updated 10 years ago
- 软件方面的包 (包括各种芯片数据处理，NGS数据处理，差异分析等等！)☆14Apr 23, 2016Updated 9 years ago
- wgs_pipeline☆18Dec 3, 2013Updated 12 years ago
- Git使用手册☆17Mar 10, 2019Updated 7 years ago
- A server for maintaining high-throughput sequencing QC data☆13Aug 5, 2025Updated 7 months ago
- An open-source R package for omics data integrative analysis in terms of network, evolution and ontology☆18Jan 4, 2024Updated 2 years ago
- Source code for ScanGEO Shiny App☆15Apr 18, 2022Updated 3 years ago
- Command-line utility to color objects of a KEGG pathway with arbitrary colors☆34Jul 10, 2015Updated 10 years ago
- Interactive Differential Expression Analyzer☆37Sep 7, 2020Updated 5 years ago
- 361 Division - Scientific Training, Education and Learning☆28Oct 1, 2020Updated 5 years ago
- Crash course for NCBI blast tools☆47Jun 17, 2019Updated 6 years ago
- Virtual Pharmacist is a web tool that interprets personal genome for the impact of genetic variation on drug response. It can take varian…☆13Nov 16, 2015Updated 10 years ago
- Convert BAM files to bigWig files with a simple command☆20Nov 30, 2018Updated 7 years ago
- From IDAT to beta.☆25Jul 13, 2018Updated 7 years ago
- synchronize your wordpress or github to hugo website automaticlly☆15Nov 2, 2021Updated 4 years ago
- An R client for broads firehose pipeline, providing TCGA data sets☆61Jun 25, 2019Updated 6 years ago
- Scripts needed to generate the figures for the Monocle 2 paper (Qiu et al, 2017)☆29Jul 1, 2020Updated 5 years ago
- Devel repository for bsseq☆39Feb 6, 2026Updated last month
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆24Mar 29, 2019Updated 6 years ago
- Integrated toolkit for analysis and evaluation of annotated genomes☆25Aug 1, 2025Updated 7 months ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. Please download the R package from the RaceID3…☆15Dec 7, 2018Updated 7 years ago
- R package for the inference of cell fate bias from single-cell RNA-seq data.☆22Jun 14, 2022Updated 3 years ago
- R Interface to the NCBI SRA metadata☆23Nov 19, 2018Updated 7 years ago
- ☆19Mar 6, 2019Updated 7 years ago
- ☆19Jul 6, 2023Updated 2 years ago
- ☆20Feb 24, 2017Updated 9 years ago
- Manipulate genomic features and validate the syntax and reference sequence of your GFF3 files☆10Dec 26, 2022Updated 3 years ago
- EpiGenome Gateway - WashU EpiGenome Browser☆21Oct 11, 2021Updated 4 years ago
- ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser☆81Mar 12, 2026Updated last week
- Analysis examples based on the ISB-CGC hosted TCGA data, using R and R Markdown.☆31Nov 27, 2017Updated 8 years ago
- Genetics training camp☆21Sep 8, 2020Updated 5 years ago
- Scripts, utilities and programs for genomic bioinformatics.☆83Nov 13, 2025Updated 4 months ago
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆15May 12, 2025Updated 10 months ago
- ☆62Aug 4, 2020Updated 5 years ago
- STAR based ENCODE Long RNA-Seq processing pipeline☆96Apr 16, 2021Updated 4 years ago
- ☆14Dec 21, 2022Updated 3 years ago
- Algorithm for detecting alternative splicing in a population of single cells. See details in Welch et al., Nucleic Acids Research 2016: h…☆23Jul 7, 2016Updated 9 years ago
- Scripts to recreate figures from the SC3 paper☆41Mar 1, 2017Updated 9 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆16Dec 3, 2018Updated 7 years ago