Alternatives and similar repositories for ms1searchpy

Users that are interested in ms1searchpy are comparing it to the libraries listed below

• CompOmics / ms2pip
  MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.
  ☆47Updated 2 weeks ago
• CompOmics / IM2Deep
  Collisional cross-section prediction for modified and multiconformational peptides
  ☆13Updated last month
• pFindStudio / pDeep3
  MS/MS prediction for peptides
  ☆24Updated 5 years ago
• Villen-Lab / pyAscore
  A python package for fast post translational modification localization, powered by Cython.
  ☆20Updated 2 years ago
• levitsky / identipy
  ☆10Updated 4 months ago
• CompOmics / psm_utils
  Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python
  ☆29Updated 2 weeks ago
• CompOmics / DeepLC
  DeepLC: Retention time prediction for peptides carrying any modification.
  ☆72Updated last month
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆49Updated 10 months ago
• MannLabs / alpharaw
  An open-source Python package to unify raw MS data accession and storage.
  ☆29Updated 3 weeks ago
• MannLabs / structuremap
  Python package for investigating the structural context of PTMs
  ☆28Updated last year
• MatteoLacki / timspy
  ☆22Updated 4 years ago
• CompOmics / ms2rescore
  Modular and user-friendly platform for AI-assisted rescoring of peptide identifications
  ☆62Updated 2 weeks ago
• idrblab / NOREVA
  R Package for Systematic Optimization of Metabolomic Data Processing
  ☆17Updated 9 months ago
• OpenMS / pyopenms_viz
  Streamlining Mass Spectrometry Data Visualization with Pandas
  ☆21Updated last week
• orsburn / LCMSMethods
  The Git Account of LCMSMethods.org
  ☆11Updated 6 years ago
• HUPO-PSI / mzSpecLib
  mzSpecLib: A standard format to exchange/distribute spectral libraries
  ☆30Updated 2 months ago
• statisticalbiotechnology / diffacto
  ☆13Updated last year
• pFindStudio / pGlyco3
  ☆21Updated 10 months ago
• bittremieuxlab / GLEAMS
  GLEAMS is a Learned Embedding for Annotating Mass Spectra.
  ☆26Updated 2 years ago
• wilhelm-lab / oktoberfest
  Rescoring and spectral library generation pipeline for proteomics.
  ☆52Updated 3 weeks ago
• fickludd / dinosaur
  Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.
  ☆45Updated 3 years ago
• wfondrie / ppx
  A Python interface to proteomics data repositories
  ☆36Updated 6 months ago
• grosenberger / easypqp
  EasyPQP: Simple library generation for OpenSWATH
  ☆11Updated 3 weeks ago
• lmsac / DeepDIA
  Using deep learning to generate in silico spectral libraries for data-independent acquisition analysis.
  ☆43Updated 3 years ago
• abdrakhimov1 / Biosaur
  ☆15Updated 3 years ago
• PHOENIXcenter / deeprtalign
  a deep learning-based retention time alignment tool for large cohort LC-MS data analysis
  ☆15Updated 2 years ago
• iomega / ms2query
  MS2Query - machine learning assisted library querying of MS/MS spectra
  ☆53Updated 2 months ago
• MarcIsak / MSLibrarian
  MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics
  ☆14Updated 3 years ago
• MetaSys-LISBP / IsoCor
  IsoCor: Isotope Correction for mass spectrometry labeling experiments
  ☆25Updated 8 months ago
• lkytal / PredFull
  This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network
  ☆34Updated 2 years ago