☆13May 4, 2026Updated 2 months ago
Alternatives and similar repositories for ms1searchpy
Users that are interested in ms1searchpy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A python interface to the SAGE search engine for mass spectrometry proteomics☆15Jul 7, 2026Updated 2 weeks ago
- DeepLC: Retention time prediction for peptides carrying any modification.☆80Jul 13, 2026Updated last week
- Collisional cross-section prediction for modified and multiconformational peptides☆14Jul 16, 2026Updated last week
- ☆17Apr 27, 2022Updated 4 years ago
- HiCOPS: Computational framework for peptide identification from MS data through accelerated database search☆10Mar 24, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆31Jul 16, 2026Updated last week
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆49Jul 13, 2026Updated last week
- ☆13Mar 19, 2024Updated 2 years ago
- Deep proteome inference from peptide profiles☆13Jul 16, 2020Updated 6 years ago
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Aug 25, 2022Updated 3 years ago
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆31Updated this week
- An open-source Python package to unify raw MS data accession and storage.☆33Jun 30, 2026Updated 3 weeks ago
- Peptide Correlation analysis☆11Oct 3, 2024Updated last year
- A Python package for peptide sequence analysis built around ProForma 2.1 notation. Calculate masses, generate fragments, predict isotopic…☆18Jul 10, 2026Updated last week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆10May 8, 2026Updated 2 months ago
- Deep (Transfer) Learning for Peptide Retention Time Prediction☆53Sep 17, 2021Updated 4 years ago
- Multiplexed data-independent acquisition (plexDIA) for increasing proteomics throughput. The code is distributed by an MIT license.☆11Mar 17, 2025Updated last year
- Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.☆45Jun 27, 2022Updated 4 years ago
- MS/MS prediction for peptides☆25Dec 18, 2020Updated 5 years ago
- A Python interface to proteomics data repositories☆38Jun 19, 2025Updated last year
- Datasets for Drug Discovery and Development☆10Aug 22, 2020Updated 5 years ago
- A library for deisotoping and charge state deconvolution of complex mass spectra☆42Jul 30, 2025Updated 11 months ago
- Proteomics Mass Spectrometry Datasets for Machine Learning☆22Aug 16, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Processing and analysis of proteomics data☆17Jul 6, 2026Updated 2 weeks ago
- A python package for fast post translational modification localization, powered by Cython.☆20Dec 15, 2023Updated 2 years ago
- ☆24Feb 26, 2023Updated 3 years ago
- A tool integrates channel abundances from multiple TMT samples and exports a general report for downstream analysis.☆14Jun 25, 2026Updated 3 weeks ago
- ☆17Jun 15, 2022Updated 4 years ago
- Matthew The's implementation of MaRaCluster☆11Jun 26, 2025Updated last year
- Find Co-Abundant Groups of Genes☆12Aug 3, 2020Updated 5 years ago
- Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provi…☆161Jul 14, 2026Updated last week
- A Framework for IMS-MS Raw Data Processing written in Rust and Python.☆23Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆17Apr 10, 2021Updated 5 years ago
- Infrastructure of AlphaX ecosystem☆56Updated this week
- A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly☆50Updated this week
- Dirichlet-Multinomial Bayesian Variable Selection☆14Jun 13, 2024Updated 2 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆20Apr 12, 2019Updated 7 years ago
- SDRF: The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆114Updated this week
- Using deep learning to generate in silico spectral libraries for data-independent acquisition analysis.☆43Oct 23, 2022Updated 3 years ago