markmipt / ms1searchpyLinks
☆10Updated last week
Alternatives and similar repositories for ms1searchpy
Users that are interested in ms1searchpy are comparing it to the libraries listed below
Sorting:
- A python package for fast post translational modification localization, powered by Cython.☆19Updated last year
- MS/MS prediction for peptides☆22Updated 4 years ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆44Updated 3 months ago
- A Python interface to proteomics data repositories☆34Updated last week
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆27Updated 2 weeks ago
- ☆10Updated 8 months ago
- EasyPQP: Simple library generation for OpenSWATH☆11Updated 2 months ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆44Updated 3 months ago
- ☆14Updated 3 years ago
- ☆20Updated 4 months ago
- Python package for investigating the structural context of PTMs☆28Updated 5 months ago
- A label free quantification tool.☆17Updated last month
- An open-source Python package to unify raw MS data accession and storage.☆25Updated 2 months ago
- ☆13Updated last year
- Democratizing ML in proteomics☆37Updated this week
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆65Updated 2 weeks ago
- MSBooster allows users to add deep learning-based features to .pin files before Percolator PSM rescoring☆19Updated last week
- The Git Account of LCMSMethods.org☆11Updated 6 years ago
- ☆24Updated 2 years ago
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 2 years ago
- Spectral library searching using approximate nearest neighbor techniques.☆43Updated last month
- TimsR: Easy access to timsTOF Pro data from R.☆10Updated 4 years ago
- Rescoring and spectral library generation pipeline for proteomics.☆43Updated this week
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆27Updated 3 weeks ago
- ☆20Updated 3 years ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆21Updated 2 months ago
- a deep learning-based retention time alignment tool for large cohort LC-MS data analysis☆12Updated last year
- DART-ID: retention time alignment and peptide identification confidence updates☆16Updated 3 months ago
- ☆17Updated 5 years ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆31Updated 3 months ago