Alternatives and similar repositories for identipy

Users that are interested in identipy are comparing it to the libraries listed below

• abdrakhimov1 / Biosaur
  ☆14Updated 3 years ago
• orsburn / LCMSMethods
  The Git Account of LCMSMethods.org
  ☆11Updated 6 years ago
• CompOmics / ms2pip
  MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.
  ☆47Updated 6 months ago
• markmipt / ms1searchpy
  ☆12Updated last week
• wilhelm-lab / oktoberfest
  Rescoring and spectral library generation pipeline for proteomics.
  ☆49Updated this week
• thermofisherlsms / iapi
  Instrument Application Programming Interface
  ☆51Updated last week
• CompOmics / DeepLC
  DeepLC: Retention time prediction for (modified) peptides using Deep Learning.
  ☆70Updated 2 weeks ago
• lkytal / PredFull
  This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network
  ☆31Updated 2 years ago
• HUPO-PSI / ProForma
  HUPO-PSI Standardized peptidoform notation
  ☆21Updated 2 weeks ago
• statisticalbiotechnology / diffacto
  ☆13Updated last year
• gagneurlab / spectralis
  ☆14Updated last year
• wilhelm-lab / dlomix
  Python framework for Deep Learning in Proteomics
  ☆30Updated last month
• MannLabs / structuremap
  Python package for investigating the structural context of PTMs
  ☆28Updated 9 months ago
• fickludd / dinosaur
  Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.
  ☆45Updated 3 years ago
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆48Updated 7 months ago
• Villen-Lab / pyAscore
  A python package for fast post translational modification localization, powered by Cython.
  ☆19Updated last year
• wilhelm-lab / koina
  Democratizing ML in proteomics
  ☆43Updated last month
• michalsta / opentims
  Open-source C++ and Python module for opening binary timsTOF data files.
  ☆49Updated 3 months ago
• mobiusklein / ms_deisotope
  A library for deisotoping and charge state deconvolution of complex mass spectra
  ☆41Updated 2 months ago
• OpenMS / pyopenms_viz
  Streamlining Mass Spectrometry Data Visualization with Pandas
  ☆20Updated last month
• MannLabs / alphapeptstats
  Python Package for the downstream analysis of mass-spectrometry-based proteomics data
  ☆74Updated last month
• MannLabs / alphatims
  An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…
  ☆90Updated last month
• CompOmics / psm_utils
  Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python
  ☆29Updated 2 months ago
• MannLabs / alpharaw
  An open-source Python package to unify raw MS data accession and storage.
  ☆28Updated last week
• mobiusklein / brainpy
  A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations
  ☆23Updated 4 months ago
• pFindStudio / pGlyco3
  ☆20Updated 7 months ago
• statisticalbiotechnology / maracluster
  Matthew The's implementation of MaRaCluster
  ☆11Updated 3 months ago
• mhoopmann / kojak
  Automatically exported from code.google.com/p/kojak-ms
  ☆13Updated 5 months ago
• wfondrie / depthcharge
  A deep learning toolkit for mass spectrometry
  ☆82Updated last year
• Rappsilber-Laboratory / XiSearch
  XiSearch
  ☆13Updated last week