Alternatives and similar repositories for identipy

Users that are interested in identipy are comparing it to the libraries listed below

• markmipt / ms1searchpy
  ☆10Updated 2 weeks ago
• MannLabs / structuremap
  Python package for investigating the structural context of PTMs
  ☆28Updated 4 months ago
• wilhelm-lab / koina
  Democratizing ML in proteomics
  ☆37Updated this week
• CompOmics / ms2pip
  MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.
  ☆43Updated 2 months ago
• orsburn / LCMSMethods
  The Git Account of LCMSMethods.org
  ☆11Updated 5 years ago
• HUPO-PSI / ProForma
  HUPO-PSI Standardized peptidoform notation
  ☆17Updated last year
• abdrakhimov1 / Biosaur
  ☆14Updated 3 years ago
• CompOmics / DeepLC
  DeepLC: Retention time prediction for (modified) peptides using Deep Learning.
  ☆63Updated 3 weeks ago
• statisticalbiotechnology / maracluster
  Matthew The's implementation of MaRaCluster
  ☆11Updated 2 years ago
• statisticalbiotechnology / diffacto
  ☆13Updated last year
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆43Updated 2 months ago
• MannLabs / alpharaw
  An open-source Python package to unify raw MS data accession and storage.
  ☆24Updated last month
• Villen-Lab / pyAscore
  A python package for fast post translational modification localization, powered by Cython.
  ☆19Updated last year
• pFindStudio / pDeep3
  MS/MS prediction for peptides
  ☆22Updated 4 years ago
• thermofisherlsms / iapi
  Instrument Application Programming Interface
  ☆46Updated 3 months ago
• HUPO-PSI / mzSpecLib
  mzSpecLib: A standard format to exchange/distribute spectral libraries
  ☆27Updated 2 weeks ago
• fickludd / dinosaur
  Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.
  ☆44Updated 2 years ago
• lkytal / PredFull
  This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network
  ☆29Updated last year
• wilhelm-lab / oktoberfest
  Rescoring and spectral library generation pipeline for proteomics.
  ☆43Updated this week
• mobiusklein / brainpy
  A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations
  ☆21Updated 4 months ago
• CompOmics / psm_utils
  Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python
  ☆27Updated last month
• pFindStudio / pGlyco3
  ☆18Updated 3 months ago
• mobiusklein / ms_deisotope
  A library for deisotoping and charge state deconvolution of complex mass spectra
  ☆37Updated last week
• mhoopmann / kojak
  Automatically exported from code.google.com/p/kojak-ms
  ☆13Updated last month
• michalsta / opentims
  Open-source C++ and Python module for opening binary timsTOF data files.
  ☆48Updated last month
• wilhelm-lab / dlomix
  Python framework for Deep Learning in Proteomics
  ☆27Updated 2 weeks ago
• Proteobench / ProteoBench
  ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…
  ☆46Updated last week
• CompOmics / ms2rescore
  Modular and user-friendly platform for AI-assisted rescoring of peptide identifications
  ☆57Updated last month
• Protea-Glycosciences / GlyCombo
  GlyCombo, a combinatorial glycan composition assignment tool
  ☆12Updated 3 months ago
• BlaisProteomics / multiplierz
  The Multiplierz Proteomics Library
  ☆24Updated last year