☆17Jun 15, 2022Updated 3 years ago
Alternatives and similar repositories for enz-pred
Users that are interested in enz-pred are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆44Jun 28, 2021Updated 4 years ago
- Repository containing scripts and analysis for ML-Guided Acyl-ACP Reductase Engineering paper☆11Nov 21, 2023Updated 2 years ago
- ☆80Sep 12, 2024Updated last year
- This repository contains the positive-unlabeled learning-based enzyme promiscuity prediction model as described in the paper Deep learnin…☆18Feb 16, 2025Updated last year
- 🧬 - Data management and modeling framework based on EnzymeML.☆26Feb 23, 2026Updated 3 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆15Sep 9, 2024Updated last year
- Predicting MS1 precursor chemical formula from MS/MS data☆25Sep 20, 2023Updated 2 years ago
- Enzyme Activity Prediction of Sequence Variants onNovel Substrates using Improved Substrate Encodings and Convolutional Pooling☆18Nov 28, 2022Updated 3 years ago
- Experiments in protein folding through language modeling☆10Dec 10, 2021Updated 4 years ago
- Adaptive string method implementation in AmberTools23 and Amber22☆15Jan 7, 2025Updated last year
- Python package to atom map, correct and suggest enzymatic reactions☆46Apr 11, 2024Updated 2 years ago
- Processing and analysis of proteomics data☆17May 31, 2026Updated last week
- Solvent network analysis. Hop is a python package based on MDAnalysis to analyze solvation dynamics.☆15Sep 20, 2018Updated 7 years ago
- Rifdock Library for Conformational Search☆174May 16, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆12May 4, 2026Updated last month
- RXN for biochemical reactions☆76Oct 18, 2022Updated 3 years ago
- ☆10Feb 21, 2022Updated 4 years ago
- DeepECtransformer☆30Oct 20, 2023Updated 2 years ago
- ☆11Sep 22, 2021Updated 4 years ago
- Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion☆18Feb 8, 2024Updated 2 years ago
- the codes for paper "IIFDTI: predicting drug target interaction through interactive and independent features based on attention mechanism…☆11Apr 7, 2022Updated 4 years ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆36Jun 1, 2022Updated 4 years ago
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆29Nov 6, 2022Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Conservation analysis of homologous proteins with Python☆13Jul 11, 2021Updated 4 years ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Aug 23, 2020Updated 5 years ago
- Pipeline for exploring protein families using homology based or vector representation based methods to generate clusters in sequence spac…☆17Mar 6, 2026Updated 3 months ago
- Algorithmic inversion of extended connectivity fingerprints (ECFP)☆24Sep 21, 2024Updated last year
- deep protein solubility prediction☆42May 12, 2019Updated 7 years ago
- The code for SAG-DTA: Prediction of Drug–Target Affinity Using Self-Attention Graph Network.☆11Dec 27, 2021Updated 4 years ago
- This is the pipeline of our new article "Enzyme Co-Scientist: Harnessing Large Language Models for Enzyme Kinetic Data Extraction from Li…☆17May 23, 2025Updated last year
- a quick primer on making prettier (and more impactful) plots☆14Sep 27, 2015Updated 10 years ago
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆40Jun 20, 2022Updated 3 years ago
- This is the implementation of the paper "VAW-GAN for Singing Voice Conversion withNon-parallel Training Data".☆17Aug 12, 2020Updated 5 years ago
- A deep-learning-based multiple toolkits (DeTool) approach that uses the inputs of enzymes and substrates for biocatalystic tasks.☆13Nov 24, 2023Updated 2 years ago
- Official repository of EnzymeFlow☆102Dec 7, 2024Updated last year
- single cell Gene co-Expression Network Analysis☆10Sep 6, 2022Updated 3 years ago
- ☆136Sep 14, 2022Updated 3 years ago
- To be a next-generation DL-based phenotype prediction from genome mutations.☆19May 17, 2021Updated 5 years ago