Alternatives and similar repositories for MSLibrarian

Users that are interested in MSLibrarian are comparing it to the libraries listed below

• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆44Updated 3 months ago
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆10Updated 4 years ago
• wfondrie / ppx
  A Python interface to proteomics data repositories
  ☆34Updated 2 months ago
• statisticalbiotechnology / diffacto
  ☆13Updated last year
• markmipt / ms1searchpy
  ☆10Updated last month
• statisticalbiotechnology / triqler
  The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code
  ☆24Updated 2 weeks ago
• computational-metabolomics / msPurity
  R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated last year
• statisticalbiotechnology / quandenser
  QUANtification by Distillation for ENhanced Signals with Error Regulation
  ☆10Updated 2 years ago
• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆27Updated this week
• CompOmics / ms2pip
  MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.
  ☆43Updated 2 months ago
• MannLabs / structuremap
  Python package for investigating the structural context of PTMs
  ☆28Updated 4 months ago
• CompOmics / psm_utils
  Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python
  ☆27Updated last month
• IFIproteomics / LFQbench
  ☆25Updated 2 years ago
• MannLabs / alpharaw
  An open-source Python package to unify raw MS data accession and storage.
  ☆24Updated last month
• Proteobench / ProteoBench
  ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…
  ☆46Updated this week
• vsegurar / DeepMSPeptide
  ☆17Updated 5 years ago
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆18Updated last year
• smith-chem-wisc / FlashLFQ
  Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics
  ☆21Updated last month
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆15Updated 2 years ago
• yeastrc / proxl-web-app
  ProXL Web App -- Visualize and Share Protein Cross-linking Data
  ☆12Updated 10 months ago
• ZhuMSLab / DecoMetDIA
  ☆11Updated 2 years ago
• HUPO-PSI / mzSpecLib
  mzSpecLib: A standard format to exchange/distribute spectral libraries
  ☆27Updated last week
• pFindStudio / pDeep3
  MS/MS prediction for peptides
  ☆22Updated 4 years ago
• wilhelm-lab / koina
  Democratizing ML in proteomics
  ☆37Updated 2 weeks ago
• kentsisresearchgroup / UltraQuant
  MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters
  ☆26Updated 6 years ago
• MatteoLacki / timspy
  ☆20Updated 3 years ago
• Nesvilab / IonQuant
  A label free quantification tool.
  ☆17Updated 3 weeks ago
• mafreitas / tdf2mzml
  ☆26Updated last year
• EuBIC / EuBIC2023
  EuBIC 2023 developer's meeting
  ☆13Updated 2 years ago
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆20Updated 11 months ago