Alternatives and similar repositories for MSLibrarian

Users that are interested in MSLibrarian are comparing it to the libraries listed below

• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆48Updated 7 months ago
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆12Updated 4 years ago
• zhengfj1994 / MetEx
  MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.
  ☆17Updated last year
• vsegurar / DeepMSPeptide
  ☆17Updated 6 years ago
• MatteoLacki / timspy
  ☆22Updated 4 years ago
• CompOmics / ms2pip
  MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.
  ☆46Updated 6 months ago
• CompOmics / IM2Deep
  Collisional cross-section prediction for modified and multiconformational peptides
  ☆13Updated 2 months ago
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆42Updated last year
• pFindStudio / pDeep3
  MS/MS prediction for peptides
  ☆24Updated 4 years ago
• HUPO-PSI / mzSpecLib
  mzSpecLib: A standard format to exchange/distribute spectral libraries
  ☆28Updated last week
• wfondrie / ppx
  A Python interface to proteomics data repositories
  ☆35Updated 3 months ago
• MannLabs / structuremap
  Python package for investigating the structural context of PTMs
  ☆28Updated 8 months ago
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆16Updated 2 years ago
• yeastrc / proxl-web-app
  ProXL Web App -- Visualize and Share Protein Cross-linking Data
  ☆13Updated 2 weeks ago
• bittremieux-lab / ANN-SoLo
  Spectral library searching using approximate nearest neighbor techniques.
  ☆45Updated 5 months ago
• shuzhao-li-lab / asari
  asari, metabolomics data preprocessing
  ☆54Updated this week
• ZhuMSLab / DecoMetDIA
  ☆11Updated 3 years ago
• ZhuMetLab / MetDNA2
  Knowledge-guided multilayer network approach is executed in MetDNA2
  ☆16Updated 2 years ago
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆20Updated last year
• xia-lab / OptiLCMS
  R package for optimized LC-MS spectra processing
  ☆25Updated 2 weeks ago
• CompOmics / psm_utils
  Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python
  ☆29Updated 2 months ago
• Roestlab / DIAlignR
  This is a R package for alignment of DIA mass-spec data
  ☆12Updated 4 years ago
• MannLabs / alpharaw
  An open-source Python package to unify raw MS data accession and storage.
  ☆28Updated this week
• EuBIC / EuBIC2023
  EuBIC 2023 developer's meeting
  ☆13Updated 2 years ago
• Roestlab / massdash
  MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization
  ☆21Updated this week
• IFIproteomics / LFQbench
  ☆24Updated 2 years ago
• gtluu / timsconvert
  ☆41Updated 6 months ago
• alexandrovteam / curatr
  ☆14Updated 2 years ago
• zmahnoor14 / MAW
  Metabolome Annotation Workflow
  ☆25Updated last year
• msproteomicstools / msproteomicstools
  Some hopefully useful tools for mass spectrometry applied to proteomics
  ☆53Updated 3 years ago