bittremieuxlab / ANN-SoLoLinks
Spectral library searching using approximate nearest neighbor techniques.
☆48Updated 9 months ago
Alternatives and similar repositories for ANN-SoLo
Users that are interested in ANN-SoLo are comparing it to the libraries listed below
Sorting:
- A Python interface to proteomics data repositories☆36Updated 7 months ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆49Updated 11 months ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆47Updated last week
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆53Updated 3 weeks ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆25Updated 3 months ago
- A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file☆33Updated 4 years ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- ☆67Updated last year
- A python package for fast post translational modification localization, powered by Cython.☆20Updated 2 years ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆50Updated this week
- A label free quantification tool.☆18Updated 2 weeks ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆83Updated 3 months ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆65Updated last week
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆31Updated last year
- ☆38Updated 2 weeks ago
- Python package for investigating the structural context of PTMs☆28Updated last year
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆100Updated last week
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆25Updated 2 years ago
- Python client for PRIDE Archive Rest API.☆29Updated last week
- Rescoring and spectral library generation pipeline for proteomics.☆53Updated last week
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆105Updated last week
- MS/MS prediction for peptides☆24Updated 5 years ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆51Updated 2 years ago
- Some hopefully useful tools for mass spectrometry applied to proteomics☆53Updated 4 years ago
- ☆27Updated 8 months ago
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 3 years ago
- pathway and network analysis for metabolomics☆43Updated last month
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆30Updated 2 months ago
- TimsR: Easy access to timsTOF Pro data from R.☆12Updated 4 years ago
- R package for functionally scoring phosphorylation sites☆21Updated 6 years ago