bittremieuxlab / ANN-SoLoView external linksLinks
Spectral library searching using approximate nearest neighbor techniques.
☆48Updated this week
Alternatives and similar repositories for ANN-SoLo
Users that are interested in ANN-SoLo are comparing it to the libraries listed below
Sorting:
- A Python interface to proteomics data repositories☆36Jun 19, 2025Updated 7 months ago
- C++ lossless and lossy mass spectrometry compression☆13Sep 16, 2021Updated 4 years ago
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆107Feb 6, 2026Updated last week
- Specter: linear deconvolution for targeted analysis of data-independent acquisition mass spectrometry proteomics☆18Oct 11, 2018Updated 7 years ago
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Aug 25, 2022Updated 3 years ago
- Python package for efficient mass spectrometry data processing and visualization☆164Dec 18, 2025Updated last month
- Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful fo…☆92Aug 17, 2023Updated 2 years ago
- Flash entropy search☆16Sep 24, 2023Updated 2 years ago
- The mwtab package is a Python library that facilitates reading and writing files in mwTab format used by the Metabolomics Workbench for a…☆12Jan 20, 2026Updated 3 weeks ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆48Updated this week
- ☆27May 20, 2025Updated 8 months ago
- A deep learning toolkit for mass spectrometry☆87Jan 7, 2026Updated last month
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆15Jun 1, 2023Updated 2 years ago
- ☆11Jun 12, 2024Updated last year
- An open-source Python package to unify raw MS data accession and storage.☆31Feb 6, 2026Updated last week
- data processing for MS-based metabolomics☆15Nov 10, 2024Updated last year
- Spectral entropy for mass spectrometry data.☆35Dec 25, 2025Updated last month
- A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly☆40Feb 9, 2026Updated last week
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆83Oct 23, 2025Updated 3 months ago
- ☆15Oct 16, 2023Updated 2 years ago
- MS/MS prediction for peptides☆24Dec 18, 2020Updated 5 years ago
- Proteomics search & quantification so fast that it feels like magic☆270Jan 6, 2026Updated last month
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆25Aug 16, 2023Updated 2 years ago
- DeepLC: Retention time prediction for peptides carrying any modification.☆73Jan 13, 2026Updated last month
- Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provi…☆150Updated this week
- ☆22Jun 28, 2021Updated 4 years ago
- Python client for PRIDE Archive Rest API.☆36Feb 6, 2026Updated last week
- A list of tools on proteomics using deep learning☆106May 5, 2024Updated last year
- Python Package for the downstream analysis of mass-spectrometry-based proteomics data☆83Nov 21, 2025Updated 2 months ago
- These workshops and tutorials provide use cases and examples for mass spectrometry data handling and analysis using the Spectra Bioconduc…☆21Aug 7, 2024Updated last year
- ☆11Nov 30, 2024Updated last year
- Implementation of UniSpec, a deep learning model for predicting full fragment ion peptide spectra.☆12Feb 11, 2025Updated last year
- Chemical Similarity Enrichment analysis of metabolomics datasets☆30Jul 19, 2024Updated last year
- Automatically exported from code.google.com/p/mstoolkit☆30Dec 1, 2025Updated 2 months ago
- AutoRT: Peptide retention time prediction using deep learning☆30Jul 31, 2024Updated last year
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆68Jan 21, 2026Updated 3 weeks ago
- mzTab Reporting MS-based Proteomics and Metabolomics Results☆45Apr 1, 2025Updated 10 months ago
- ☆31Dec 7, 2025Updated 2 months ago
- Using deep learning to generate in silico spectral libraries for data-independent acquisition analysis.☆43Oct 23, 2022Updated 3 years ago