PHOENIXcenter / deeprtalignLinks
a deep learning-based retention time alignment tool for large cohort LC-MS data analysis
☆13Updated last year
Alternatives and similar repositories for deeprtalign
Users that are interested in deeprtalign are comparing it to the libraries listed below
Sorting:
- allows MAGMa metabolite identification with dynamic parameter selection☆9Updated 6 years ago
- EasyPQP: Simple library generation for OpenSWATH☆11Updated 3 months ago
- ☆9Updated last month
- ☆17Updated 6 years ago
- ☆12Updated last month
- ☆10Updated 8 months ago
- Collisional cross-section prediction for modified and multiconformational peptides☆12Updated 3 weeks ago
- DeepMASS2 is a cross-platform GUI software tool, which enables deep-learning based metabolite annotation via semantic similarity analysis…☆9Updated last month
- MS/MS prediction for peptides☆24Updated 4 years ago
- Processing and analysis of proteomics data☆17Updated 4 months ago
- Repo hosting the MetFrag website☆10Updated 6 months ago
- Relaunch of the initial MetFrag project.☆18Updated this week
- MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS☆16Updated 3 weeks ago
- A small library to provide peak picking for software processing mass spectrometry data☆23Updated 8 months ago
- generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.☆16Updated 5 years ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Updated last year
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆16Updated 2 years ago
- Improve the accuracy of database search by using BERT to embed MS/MS reasonably☆18Updated 9 months ago
- ☆19Updated 4 months ago
- ☆16Updated last week
- A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Updated last year
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆15Updated 2 weeks ago
- This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network☆31Updated 2 years ago
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆13Updated 3 weeks ago
- ☆23Updated 4 months ago
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆22Updated 8 months ago
- Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.☆17Updated last year
- R Package for Systematic Optimization of Metabolomic Data Processing☆17Updated 4 months ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Updated 2 years ago
- ☆11Updated last year