PHOENIXcenter / deeprtalign
a deep learning-based retention time alignment tool for large cohort LC-MS data analysis
☆11Updated last year
Alternatives and similar repositories for deeprtalign:
Users that are interested in deeprtalign are comparing it to the libraries listed below
- allows MAGMa metabolite identification with dynamic parameter selection☆9Updated 5 years ago
- ☆8Updated 5 months ago
- R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆15Updated 9 months ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Updated 2 years ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆13Updated last year
- ☆16Updated 5 years ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆18Updated last year
- An open-source Python package to unify raw MS data accession and storage.☆19Updated this week
- metabolite identification R-package for metabolomic high-resolution LC-MS datasets.☆14Updated 7 years ago
- ☆11Updated 2 years ago
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆12Updated 2 years ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆23Updated last year
- MS/MS prediction for peptides☆22Updated 4 years ago
- LipidFinder: A computational workflow for discovery of new lipid molecular species☆19Updated 4 years ago
- A small library to provide peak picking for software processing mass spectrometry data☆21Updated 2 months ago
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆18Updated 3 months ago
- Streamlining Mass Spectrometry Data Visualization with Pandas☆11Updated last week
- ☆10Updated 2 years ago
- Relaunch of the initial MetFrag project.☆18Updated 2 weeks ago
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆16Updated last year
- Molecular formula discovery via bottom-up MS/MS interrogation☆13Updated 5 months ago
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 2 years ago
- EasyPQP: Simple library generation for OpenSWATH☆10Updated last month
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆13Updated last year
- A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data☆19Updated last year
- ☆25Updated last year
- Spectral entropy for mass spectrometry data.☆24Updated 2 months ago
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆25Updated last year
- MSBooster allows users to add deep learning-based features to .pin files before Percolator PSM rescoring☆17Updated this week
- R Package for Systematic Optimization of Metabolomic Data Processing☆16Updated last year