mobiusklein / ms_peak_pickerLinks
A small library to provide peak picking for software processing mass spectrometry data
☆23Updated last year
Alternatives and similar repositories for ms_peak_picker
Users that are interested in ms_peak_picker are comparing it to the libraries listed below
Sorting:
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆16Updated 2 months ago
- IsoCor: Isotope Correction for mass spectrometry labeling experiments☆25Updated 9 months ago
- pyQms, generalized, fast and accurate mass spectrometry data quantification☆28Updated last month
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆33Updated last month
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆24Updated last year
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆23Updated 8 months ago
- A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Updated last year
- Plotting mass spectra with Matplotlib☆34Updated 9 years ago
- a python package for molecular formula analysis in MS-based small molecule studies☆32Updated 2 weeks ago
- ☆37Updated last month
- A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML☆22Updated last year
- TidyMS: Tools for working with MS data in untargeted metabolomics☆60Updated last year
- ☆29Updated 2 years ago
- PyMassSpec extension for searching mass spectra using NIST's Mass Spectrum Search Engine.☆22Updated 3 weeks ago
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆34Updated 4 years ago
- ☆15Updated 4 years ago
- ☆23Updated 10 months ago
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆31Updated last year
- Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.☆17Updated last year
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆59Updated 2 months ago
- This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network☆34Updated 2 years ago
- Collisional cross-section prediction for modified and multiconformational peptides☆13Updated 3 weeks ago
- ☆16Updated 3 years ago
- A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data☆26Updated 2 years ago
- Spectral entropy for mass spectrometry data.☆34Updated last month
- BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)☆19Updated 2 years ago
- Tools for analysis of Mass Spectrometry data using the Wasserstein metric☆18Updated last year
- Improve the accuracy of database search by using BERT to embed MS/MS reasonably☆19Updated last year
- ☆20Updated 2 years ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆29Updated last month