Alternatives and similar repositories for ms_deisotope

Users that are interested in ms_deisotope are comparing it to the libraries listed below

• thermofisherlsms / iapi
  Instrument Application Programming Interface
  ☆47Updated 4 months ago
• statisticalbiotechnology / maracluster
  Matthew The's implementation of MaRaCluster
  ☆11Updated 2 years ago
• bittremieux-lab / falcon
  Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.
  ☆29Updated last month
• BlaisProteomics / multiplierz
  The Multiplierz Proteomics Library
  ☆24Updated last year
• gtluu / timsconvert
  ☆37Updated 3 months ago
• MannLabs / alpharaw
  An open-source Python package to unify raw MS data accession and storage.
  ☆25Updated 2 months ago
• HUPO-PSI / mzSpecLib
  mzSpecLib: A standard format to exchange/distribute spectral libraries
  ☆27Updated 3 weeks ago
• abdrakhimov1 / Biosaur
  ☆14Updated 3 years ago
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆44Updated 3 months ago
• Proteobench / ProteoBench
  ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…
  ☆46Updated last week
• mafreitas / tdf2mzml
  ☆26Updated last year
• thermofisherlsms / RawFileReader
  ☆59Updated 3 months ago
• kevinkovalchik / RawTools
  RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…
  ☆64Updated 2 years ago
• wilhelm-lab / koina
  Democratizing ML in proteomics
  ☆37Updated last week
• CompOmics / ms2pip
  MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.
  ☆44Updated 3 months ago
• PNNL-Comp-Mass-Spec / Thermo-Raw-File-Reader
  .NET DLL wrapper for reading Thermo .Raw files. Uses ThermoFisher.CommonCore NuGet packages provided by Thermo Fisher Scientific
  ☆38Updated 2 months ago
• wilhelm-lab / oktoberfest
  Rescoring and spectral library generation pipeline for proteomics.
  ☆43Updated this week
• MannLabs / alphatims
  An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…
  ☆87Updated 3 months ago
• frallain / pymsfilereader
  Thermo MSFileReader Python bindings
  ☆68Updated 4 years ago
• pFindStudio / pGlyco3
  ☆20Updated 4 months ago
• michalsta / opentims
  Open-source C++ and Python module for opening binary timsTOF data files.
  ☆48Updated last week
• fickludd / dinosaur
  Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.
  ☆44Updated 2 years ago
• michaelmarty / UniDec
  Universal Deconvolution of Mass and Ion Mobility Spectra
  ☆71Updated last week
• Protea-Glycosciences / GlyCombo
  GlyCombo, a combinatorial glycan composition assignment tool
  ☆12Updated 4 months ago
• MannLabs / timsrust
  ☆26Updated last month
• Nesvilab / PTM-Shepherd
  A tool for summarizing open search results
  ☆16Updated last month
• chhh / batmass
  Mass spectrometry data visualization
  ☆36Updated 4 years ago
• michaelmarty / MassSpecCodingClub
  A community dedicated to education of computer coding applied to mass spectrometry applications.
  ☆52Updated last year
• OpenMS / pyopenms_viz
  Streamlining Mass Spectrometry Data Visualization with Pandas
  ☆17Updated last month
• CompOmics / DeepLC
  DeepLC: Retention time prediction for (modified) peptides using Deep Learning.
  ☆65Updated 2 weeks ago