An open-source Python package to unify raw MS data accession and storage.
☆31Mar 18, 2026Updated last week
Alternatives and similar repositories for alpharaw
Users that are interested in alpharaw are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆50Feb 10, 2026Updated last month
- A deep learning toolkit for mass spectrometry☆87Jan 7, 2026Updated 2 months ago
- DLL and SO from Bruker.☆12Feb 25, 2026Updated last month
- Modular and user-friendly platform for AI-assisted rescoring of peptide identifications☆63Mar 18, 2026Updated last week
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆30Feb 12, 2026Updated last month
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- DeepLC: Retention time prediction for peptides carrying any modification.☆74Mar 16, 2026Updated last week
- ☆28May 20, 2025Updated 10 months ago
- AlphaViz is a cutting-edge browser-based interactive visualization tool allowing to visualize the processed mass spectrometry data acquir…☆37Mar 18, 2026Updated last week
- A modular, python-based framework for mass spectrometry. Powered by nbdev.☆185Apr 19, 2024Updated last year
- Flash entropy search☆16Sep 24, 2023Updated 2 years ago
- Collisional cross-section prediction for modified and multiconformational peptides☆13Mar 18, 2026Updated last week
- a deep learning-based retention time alignment tool for large cohort LC-MS data analysis☆15Dec 6, 2023Updated 2 years ago
- data processing for MS-based metabolomics☆15Nov 10, 2024Updated last year
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆94Mar 18, 2026Updated last week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆26Updated this week
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆30Oct 31, 2025Updated 4 months ago
- An open-source Python package for dia-PASEF methods with Automated Isolation Design (py_diAID) from the Mann Labs at the Max Planck Inst…☆28Updated this week
- This is a collection of minimal code to visualize various aspects of proteomics data.☆83Jan 6, 2022Updated 4 years ago
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆60Jan 7, 2026Updated 2 months ago
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆100Mar 18, 2026Updated last week
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆33Updated this week
- modular & open DIA search☆105Mar 19, 2026Updated last week
- Core Utils for Mass Spectrometry Data☆17Mar 16, 2026Updated last week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Fundamental functions, annotation pipeline and constants for oktoberfest☆13Updated this week
- Open-source C++ and Python module for opening binary timsTOF data files.☆50Updated this week
- Spectral entropy for mass spectrometry data.☆36Mar 17, 2026Updated last week
- Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provi…☆151Mar 11, 2026Updated 2 weeks ago
- Deep learning framework for proteomics☆146Mar 18, 2026Updated last week
- Annotation of in source LC/MS data☆12Oct 19, 2024Updated last year
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆68Mar 17, 2026Updated last week
- A Deep LEArning-based Mass Spectra Embedder for spectral similarity scoring☆11Jun 18, 2025Updated 9 months ago
- Paper collection about de novo peptide Sequening☆23Feb 5, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A Python interface to proteomics data repositories☆36Jun 19, 2025Updated 9 months ago
- Specter: linear deconvolution for targeted analysis of data-independent acquisition mass spectrometry proteomics☆18Oct 11, 2018Updated 7 years ago
- EasyPQP: Simple library generation for OpenSWATH☆11Mar 18, 2026Updated last week
- R Interface to the ClassyFire REST API☆12Feb 21, 2025Updated last year
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Jan 24, 2024Updated 2 years ago
- ☆46Mar 14, 2025Updated last year
- Fast and flexible semi-supervised learning for peptide detection in Python☆50Feb 27, 2025Updated last year