Rosetta FunFolDes – a general framework for the computational design of functional proteins.
☆21Apr 12, 2019Updated 6 years ago
Alternatives and similar repositories for FunFolDesData
Users that are interested in FunFolDesData are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11May 16, 2020Updated 5 years ago
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆18May 2, 2021Updated 4 years ago
- Parametric Building of de novo Functional Topologies☆44Mar 11, 2022Updated 4 years ago
- protein docking stuff☆52Apr 2, 2026Updated last week
- Scripts and data deposition for de novo heterodimers manuscript☆11Dec 15, 2018Updated 7 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆52Mar 7, 2025Updated last year
- Tutorial files☆12Aug 7, 2024Updated last year
- Rotamer Interaction Field Python Libraries for Computational Protein Design☆14Feb 2, 2018Updated 8 years ago
- A toolkit for predicting the binding mode of small molecules interacting with proteins based on interfacial rigidification, as assessed b…☆10Nov 22, 2016Updated 9 years ago
- ☆28Dec 6, 2022Updated 3 years ago
- ☆15Jun 11, 2021Updated 4 years ago
- A complete, open-source, end-to-end re-implementation of the Church Lab's low-N eUniRep in silico protein engineering pipeline presented …☆27Aug 7, 2020Updated 5 years ago
- bakerlab pymol scripts☆26Feb 6, 2020Updated 6 years ago
- Some scripts that I keep using over and over.☆21Jul 5, 2025Updated 9 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆20Oct 4, 2022Updated 3 years ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Oct 27, 2021Updated 4 years ago
- De novo design of small molecule binding sites into proteins☆12Apr 14, 2021Updated 4 years ago
- What exactly are the non-canonical amino acids in the Rosetta database folder?☆12Feb 16, 2020Updated 6 years ago
- ☆18Mar 13, 2024Updated 2 years ago
- ☆37Dec 21, 2023Updated 2 years ago
- Deep convolutional neural networks for protein contact map prediction☆23Aug 5, 2019Updated 6 years ago
- PyDock Tutorial☆35Jul 2, 2018Updated 7 years ago
- Scripts and data to run AbDesign as described in Tools for protein science 2021☆14Nov 4, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- GREMLIN is a method to learn a statistical model of a protein family that captures both conservation and co-evolution patterns in the fam…☆23Jul 3, 2016Updated 9 years ago
- ProteinFeatureAnalyzer extracts, analyzes and visualizes features from protein structures.☆14Mar 14, 2020Updated 6 years ago
- Scripts used for Mulligan et al. (2020): Computationally-designed peptide macrocycle inhibitors of New Delhi metallo-beta-lactamase 1☆19Aug 20, 2021Updated 4 years ago
- Universal framework for physically based computational protein design☆37Aug 19, 2023Updated 2 years ago
- Repository of all EJP lab computational projects☆15Feb 13, 2026Updated last month
- Code used in the manuscript for De Novo Design of Bioactive Protein Switches☆16May 16, 2019Updated 6 years ago
- Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.☆89Jun 18, 2021Updated 4 years ago
- ☆11Apr 21, 2023Updated 2 years ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆54May 2, 2022Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Colorblind-friendly, perceptually uniform palettes for pymol☆21Jan 25, 2021Updated 5 years ago
- ☆15Jun 22, 2020Updated 5 years ago
- The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…☆33Dec 14, 2023Updated 2 years ago
- 🔍 Fit3D - An application for template-based detection of small structural motifs in protein structures and macromolecular structure data…☆11Oct 16, 2018Updated 7 years ago
- Rosetta Funclib☆25May 9, 2020Updated 5 years ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆49Mar 21, 2024Updated 2 years ago
- Python interface for the RCSB search API.☆20Mar 20, 2024Updated 2 years ago