DeepMass is a suite of tools to enable mass spectrometry data analysis using modern machine learning techniques.
☆53Nov 18, 2021Updated 4 years ago
Alternatives and similar repositories for deepmass
Users that are interested in deepmass are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- AutoRT: Peptide retention time prediction using deep learning☆30Jul 31, 2024Updated last year
- Some hopefully useful tools for mass spectrometry applied to proteomics☆53Oct 12, 2021Updated 4 years ago
- A known-to-unknown metabolite identification workflow☆21Sep 15, 2020Updated 5 years ago
- Mass Spectrometry for Small Molecules using Deep Learning☆135Jun 30, 2021Updated 4 years ago
- MS/MS prediction for peptides☆24Dec 18, 2020Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆24Feb 26, 2023Updated 3 years ago
- pDeepXL: MS/MS spectrum prediction for cross-linked peptide pairs by deep learning☆12Feb 8, 2021Updated 5 years ago
- ☆11Feb 20, 2026Updated last month
- Plotting utilities for mass spectrometry data☆10Apr 26, 2021Updated 4 years ago
- A modular JavaScript viewer for mass spectrometry data☆12May 20, 2022Updated 3 years ago
- Software for data-independent acquisition (DIA) proteomic data processing with deep representation features.☆15Sep 19, 2025Updated 7 months ago
- This is the git repository matching the Bioconductor package CAMERA: Collection of annotation related methods for mass spectrometry data☆14May 9, 2025Updated 11 months ago
- mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data☆14Apr 9, 2016Updated 10 years ago
- This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network☆34Aug 4, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- MS File ToolBox - tools for parsing some mass-spectrometry related file formats (mzML, mzXML, pep.xml, prot.xml, etc.)☆12Aug 26, 2022Updated 3 years ago
- Waters2mzML converts & subsequently annotates Waters .raw MSn data (both MSe & DDA) into functional .mzML files. Obtained .mzML files can…☆19Aug 17, 2023Updated 2 years ago
- Specter: linear deconvolution for targeted analysis of data-independent acquisition mass spectrometry proteomics☆18Oct 11, 2018Updated 7 years ago
- Library for mass spectrometry projects☆26Updated this week
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆33Mar 21, 2026Updated 3 weeks ago
- Computational analysis for mass spectrometry-based proteomics data☆11Apr 25, 2016Updated 9 years ago
- Automatically exported from code.google.com/p/mstoolkit☆30Dec 1, 2025Updated 4 months ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Jan 24, 2024Updated 2 years ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆49Apr 8, 2026Updated last week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆11Apr 10, 2022Updated 4 years ago
- Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".☆31Apr 11, 2023Updated 3 years ago
- Access Orbitrap data in R lang using C# .NET assembly - bioconductor package☆61Feb 10, 2026Updated 2 months ago
- ☆11Nov 30, 2024Updated last year
- G-Aligner: a graph-based feature alignment method for untargeted LC-MS-based metabolomics☆17Mar 9, 2024Updated 2 years ago
- Molecular fingerprint prediction from MS/MS (FingerID).☆19Feb 28, 2018Updated 8 years ago
- Package for analyzing MS with Python☆10Jan 11, 2018Updated 8 years ago
- DeepMASS2 is a cross-platform GUI software tool, which enables deep-learning based metabolite annotation via semantic similarity analysis…☆14Jan 22, 2026Updated 2 months ago
- ☆15Oct 4, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- metabolomics data analysis platform☆21Apr 21, 2023Updated 2 years ago
- PRIDE Inspector is a Java desktop application to visualise and Quality Assessment on Mass Spectrometry data and Proteomics☆16Aug 11, 2022Updated 3 years ago
- Used to deisotope mass spectra and to detect features from mass spectrometry data using observed isotopic signatures.☆19Oct 23, 2025Updated 5 months ago
- Group-DIA, a software for analyzing multiple DIA data files☆13Dec 5, 2016Updated 9 years ago
- ☆13May 10, 2021Updated 4 years ago
- This is a R package for alignment of DIA mass-spec data☆12Jan 31, 2026Updated 2 months ago
- Shiny app for retention time prediction☆11Dec 1, 2025Updated 4 months ago