Proteomics Mass Spectrometry Datasets for Machine Learning
☆22Aug 16, 2024Updated last year
Alternatives and similar repositories for PROSPECT
Users that are interested in PROSPECT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python framework for Deep Learning in Proteomics☆40May 6, 2026Updated 2 weeks ago
- Fundamental functions, annotation pipeline and constants for oktoberfest☆13May 12, 2026Updated last week
- A list of tools on proteomics using deep learning☆108May 14, 2026Updated last week
- ☆23May 11, 2026Updated last week
- ☆17Oct 1, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆12May 4, 2026Updated 2 weeks ago
- Democratizing ML in proteomics☆53May 6, 2026Updated 2 weeks ago
- Community-curated tutorials and datasets for ML in proteomics☆59Oct 31, 2025Updated 6 months ago
- A deep learning toolkit for mass spectrometry☆90Jan 7, 2026Updated 4 months ago
- A Python interface to proteomics data repositories☆37Jun 19, 2025Updated 11 months ago
- DeepLC: Retention time prediction for peptides carrying any modification.☆76Apr 24, 2026Updated 3 weeks ago
- ☆12Jun 13, 2024Updated last year
- An open-source Python package to unify raw MS data accession and storage.☆32Apr 13, 2026Updated last month
- This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network☆34Aug 4, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Predicting molecular structure from multimodal spectroscopic data☆28Mar 9, 2026Updated 2 months ago
- Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful fo…☆92Aug 17, 2023Updated 2 years ago
- Python package for efficient mass spectrometry data processing and visualization☆169Mar 5, 2026Updated 2 months ago
- Transformer deep learning model for de novo sequencing of data-independent acquisition mass spectrometry data☆32Mar 3, 2026Updated 2 months ago
- Pytorch implementation of DeepNovoV2, a state-of-the-art de novo peptide sequencing model.☆27May 21, 2019Updated 6 years ago
- A comprehensive tutorial for proteomics data analysis in R that utilizes packages developed by researchers at PNNL and from Bioconductor.☆11May 28, 2022Updated 3 years ago
- [NeurIPS 2024] "NovoBench: Benchmarking Deep Learning-based \emph{De Novo} Sequencing Methods in Proteomics"☆13Nov 23, 2024Updated last year
- ☆10Mar 31, 2023Updated 3 years ago
- Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments☆13Mar 25, 2026Updated last month
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Initial recommendations for performing, benchmarking, and reporting single-cell proteomics experiments. The code is distributed under an …☆12Apr 5, 2023Updated 3 years ago
- ☆12Mar 1, 2025Updated last year
- Paper collection about de novo peptide Sequening☆23Feb 5, 2025Updated last year
- Web-tool for calculating and visualizing hydrophobic protrusions☆11Feb 22, 2022Updated 4 years ago
- Integrated Genome Modeling (IGM): multi-modal data-driven simulator of genome structures☆12Jun 15, 2023Updated 2 years ago
- A library for deisotoping and charge state deconvolution of complex mass spectra☆41Jul 30, 2025Updated 9 months ago
- An R package of High-resolution Informatics Toolbox for Maldi-imaging Proteomics☆19Oct 2, 2025Updated 7 months ago
- Proteomics search & quantification so fast that it feels like magic☆289May 8, 2026Updated last week
- De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model☆186May 7, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆22Mar 26, 2025Updated last year
- Repository for Deep Learning Models for Mass Spectrometry written in Rust☆17May 6, 2026Updated 2 weeks ago
- Set of scripts to get useful information within docker containers.☆17Jan 3, 2025Updated last year
- The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra☆41Oct 30, 2024Updated last year
- Single cell proteomics data processing☆32Apr 6, 2026Updated last month
- Free Dmitry Bogatov☆12Apr 29, 2018Updated 8 years ago
- The Mouse Gastrointestinal Bacteria Catalogue☆16Apr 14, 2022Updated 4 years ago