fickludd / dinosaur
Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.
☆44Updated 2 years ago
Alternatives and similar repositories for dinosaur:
Users that are interested in dinosaur are comparing it to the libraries listed below
- ☆13Updated last year
- Instrument Application Programming Interface☆46Updated 2 months ago
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆43Updated 2 months ago
- pyQms, generalized, fast and accurate mass spectrometry data quantification☆28Updated 10 months ago
- Democratizing ML in proteomics☆36Updated 2 weeks ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆46Updated this week
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆63Updated 2 weeks ago
- MS/MS prediction for peptides☆22Updated 4 years ago
- GlyCombo, a combinatorial glycan composition assignment tool☆12Updated 2 months ago
- Open-source C++ and Python module for opening binary timsTOF data files.☆48Updated last month
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆24Updated last month
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆43Updated last month
- Mass spectrometry data visualization☆36Updated 4 years ago
- Some hopefully useful tools for mass spectrometry applied to proteomics☆53Updated 3 years ago
- An open-source Python package to unify raw MS data accession and storage.☆24Updated 3 weeks ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆20Updated 2 weeks ago
- Python package for investigating the structural context of PTMs☆28Updated 3 months ago
- A Python interface to proteomics data repositories☆34Updated 2 months ago
- .NET DLL wrapper for reading Thermo .Raw files. Uses ThermoFisher.CommonCore NuGet packages provided by Thermo Fisher Scientific☆38Updated last month
- Rescoring and spectral library generation pipeline for proteomics.☆43Updated last week
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆85Updated 3 weeks ago
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆64Updated last year
- The Multiplierz Proteomics Library☆24Updated last year
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆27Updated 3 weeks ago
- ☆14Updated 3 years ago
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆82Updated last month
- ☆18Updated 2 months ago
- A simple tool to help you manually discover the depths of your (complex) spectra, one spectrum at a time.☆26Updated last week
- TimsR: Easy access to timsTOF Pro data from R.☆10Updated 3 years ago