maggiecrow / MetaNeighborLinks
☆48Updated 7 years ago
Alternatives and similar repositories for MetaNeighbor
Users that are interested in MetaNeighbor are comparing it to the libraries listed below
Sorting:
- Clone of the Bioconductor repository for the scran package.☆44Updated last year
- A machine learning method for the discovery of the minimum marker gene combinations for cell type identification from single-cell RNA seq…☆65Updated last month
- Single Cell Cluster Evaluation☆97Updated 4 years ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆85Updated last year
- ☆37Updated 9 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 4 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 4 years ago
- An R-based interface for loom files☆67Updated 5 years ago
- VoxHunt: Resolving human brain organoid heterogeneity through single-cell genomic comparison to spatial brain maps☆47Updated last year
- Single-Cell Clustering Assessment Framework☆105Updated last year
- A method to rapidly assess cell type identity using both functional and random gene sets☆39Updated 9 months ago
- R package for specialised analysis of single cell data☆39Updated 3 years ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆55Updated 4 months ago
- R package for semi-supervised single-cell data integration☆90Updated 2 months ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆89Updated 4 months ago
- Capybara: A computational tool to measure cell identity and fate transitions☆59Updated 3 years ago
- analysis of single cell RNA sequencing data and cell type annotation☆19Updated 5 years ago
- ☆63Updated 5 years ago
- Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.☆60Updated this week
- ☆43Updated 4 years ago
- ☆70Updated last year
- Identify genes with spatial expression trends in single-cell gene expression data☆50Updated 7 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆43Updated 3 years ago
- Mouse cell atlas☆61Updated 5 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆90Updated 3 months ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- R implementation of MULTI-seq sample classification workflow☆64Updated last year
- An R toolkit for estimation of cell composition from bulk expression data☆79Updated 4 months ago
- ☆41Updated 4 years ago
- ☆94Updated last month