Tools and scripts for EASI-FISH image data analysis
☆17Oct 19, 2022Updated 3 years ago
Alternatives and similar repositories for EASI-FISH
Users that are interested in EASI-FISH are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- EASI-FISH analysis pipeline for spatial transcriptomics☆36Apr 15, 2026Updated 3 months ago
- Building Gene Sets and Mapping mFISH Data☆16Aug 20, 2025Updated 11 months ago
- Tools for distributed alignment of massive images☆95Updated this week
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆34Oct 17, 2023Updated 2 years ago
- ☆13Feb 27, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Matlab software for the analysis of MERFISH data and the construction of MERFISH probes.☆51Aug 1, 2021Updated 4 years ago
- Tool for precise, interactive, fast and scalable FISH spot detection☆53Feb 4, 2025Updated last year
- Interactive and integrated analysis of multiplexed tissue microarrays☆15Jul 13, 2026Updated last week
- ☆14Jan 16, 2019Updated 7 years ago
- code for composite in situ imaging (cisi) analysis☆12Oct 26, 2020Updated 5 years ago
- Feature Ranking in (possibly large) Clustered Single Cell Data☆42Apr 15, 2021Updated 5 years ago
- ☆49Mar 1, 2018Updated 8 years ago
- An open-source ecosystem of hardware and software for head-fixed behavior☆14Sep 25, 2025Updated 9 months ago
- cluster stability measurement by subsampling and reclustering with Seurat V3 and V4☆11Jul 9, 2021Updated 5 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Generate HCR-style Probe Pairs for mRNA visualization☆47Sep 19, 2023Updated 2 years ago
- Multiscale Image Restoration for fluorescence microscopy☆10Jun 17, 2023Updated 3 years ago
- Fusing image tiles with dask array's map_blocks☆31Feb 27, 2024Updated 2 years ago
- DataJoint Element for behavioral analysis with DeepLabCut☆13May 20, 2025Updated last year
- a free, open-source web app for annotating, training, and evaluating image understanding algorithms☆25Nov 23, 2021Updated 4 years ago
- ImageJ convenience layer for N5☆21Jun 29, 2026Updated 3 weeks ago
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆166Updated this week
- ☆53Apr 1, 2021Updated 5 years ago
- MERFISH decoding software☆27Aug 16, 2025Updated 11 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A Matlab package to perform Pareto Task Inference (ParTI), which infers tasks from high-dimensional datasets.