smorabit / hdWGCNA_paperLinks
Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)
☆16Updated 2 years ago
Alternatives and similar repositories for hdWGCNA_paper
Users that are interested in hdWGCNA_paper are comparing it to the libraries listed below
Sorting:
- MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…☆24Updated 2 years ago
- ☆58Updated last year
- ☆22Updated last year
- ☆50Updated 5 years ago
- Collection of scripts for analysis of pan fetal immune atlas☆27Updated 3 years ago
- ☆22Updated 2 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆73Updated 2 weeks ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆32Updated 9 months ago
- Spatial transcriptomics of heart tissue☆22Updated 3 years ago
- ☆37Updated 2 years ago
- Functions for single cell data analysis☆32Updated 4 years ago
- Unsupervised Inference of Developmental Directions for Single Cells☆22Updated last year
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆50Updated 7 months ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 4 months ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆42Updated last year
- ☆30Updated 6 months ago
- R package for pathway analysis in scRNA-seq data☆75Updated last year
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- ☆18Updated last year
- ☆14Updated last year
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆27Updated 4 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆38Updated 4 years ago
- Code for single-cell eQTL analysis of memory T cell data in Nathan, et al. bioRxiv (2021)☆20Updated 2 years ago
- A pipeline for scRNA-seq data analysis☆15Updated 5 months ago
- ☆37Updated 2 years ago
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆28Updated last year
- A R package for advanced single cell data viz☆68Updated last year
- ☆21Updated 2 years ago