smorabit / hdWGCNA_paper
Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)
☆14Updated last year
Alternatives and similar repositories for hdWGCNA_paper:
Users that are interested in hdWGCNA_paper are comparing it to the libraries listed below
- Aligning gene expression trajectories of single-cell reference and query systems☆59Updated 4 months ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆28Updated 2 years ago
- Collection of scripts for analysis of pan fetal immune atlas☆26Updated 2 years ago
- Unsupervised Inference of Developmental Directions for Single Cells☆21Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆32Updated 4 years ago
- ☆37Updated 2 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 3 months ago
- Functions for single cell data analysis☆30Updated 3 years ago
- Code for single-cell eQTL analysis of memory T cell data in Nathan, et al. bioRxiv (2021)☆16Updated last year
- Spatial transcriptomics of heart tissue☆20Updated 2 years ago
- ☆14Updated last year
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆28Updated 8 months ago
- ☆18Updated 11 months ago
- ☆22Updated last year
- Method for de novo mutation calling from droplet based single cell RNA seq data☆12Updated 3 years ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆24Updated last week
- MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…☆21Updated last year
- Inference of cell-cell communication from single-cell RNAseq data☆47Updated last year
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆32Updated 4 years ago
- scGSVA: Perform GSVA for single cell RNA seq☆55Updated 3 months ago
- code for data processing and visualisation associated with the stromal subclasses manuscript☆11Updated 4 years ago
- ☆17Updated 11 months ago
- ☆45Updated 5 years ago
- ☆54Updated last year
- HCC single cell analysis for Alvarez, Benhammou et al.☆16Updated 2 years ago
- ☆16Updated last year
- ☆19Updated last year
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆26Updated 2 months ago
- Accurate and fast cell marker gene identification with COSG☆41Updated last year