☆14Feb 21, 2023Updated 3 years ago
Alternatives and similar repositories for cytograph2
Users that are interested in cytograph2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Auto-annotations from Mouse brain development☆12Jul 11, 2020Updated 6 years ago
- Algorithms for single-cell analysis☆29Jul 19, 2021Updated 5 years ago
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆12Apr 19, 2023Updated 3 years ago
- ☆16Mar 8, 2024Updated 2 years ago
- ☆50Mar 1, 2018Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Cytograph version used for adult human-brain analysis☆102Jun 5, 2026Updated last month
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆39Aug 10, 2023Updated 2 years ago
- Batch Correction and Adaptive Contrast Calling in Complex RNA-seq Experimental Designs Using DESeq2☆17Feb 12, 2026Updated 5 months ago
- Code relating to http://dx.doi.org/10.2139/ssrn.4132721☆11Nov 24, 2022Updated 3 years ago
- Trends in single cell papers☆17Sep 23, 2024Updated last year
- A package for analyzing spatial transcriptomics data with Gaussian smoothing, spatial gene correlation network clustering, gene module vi…☆22Apr 3, 2026Updated 3 months ago
- ☆13Sep 3, 2025Updated 10 months ago
- Implementation of the MSqRob analysis of differentially expressed proteins using the Features infrastructure☆13Jul 1, 2026Updated 3 weeks ago
- Nested cross-validation with feature selection filters☆17Jul 14, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An R/Bioconductor package to identify higher-order molecular phenotypes☆19Jan 15, 2024Updated 2 years ago
- ☆22Oct 30, 2022Updated 3 years ago
- Data-driven signal detection for unbiased scRNA-seq data analysis☆24Jan 22, 2026Updated 6 months ago
- heatmap3 is an improved heatmap package. It is completely compatible with the original R function heatmap, and provides some more powerfu…☆11Sep 2, 2021Updated 4 years ago
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆27May 12, 2020Updated 6 years ago
- Code repository for TCAT analyses☆15Sep 26, 2025Updated 9 months ago
- Stitch multiple Visium slides together☆17Oct 16, 2025Updated 9 months ago
- A Python wrapper for the bioRxiv API.☆11Aug 18, 2021Updated 4 years ago
- Analysis pipeline for the adolescent mouse nervous system project☆25Jun 5, 2026Updated last month
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Learning meaningful representations of genes☆21Jul 7, 2025Updated last year
- AnceTran2.0: R package for transcriptome evolution analysis based on RNA-seq expression data or ChIP-seq TF-binding data☆11May 19, 2019Updated 7 years ago
- SCassist : An AI Based Workflow Assistant for Single-Cell Analysis☆33Aug 22, 2025Updated 11 months ago
- Grabs Historic bitcoin and altcoin data (hourly timeframe) from bitstamp and poloniex and saves to a csv file☆11Jun 7, 2018Updated 8 years ago
- Annotated sequence data☆11Feb 2, 2025Updated last year
- Genomic sequence preprocessing toolkit☆14Updated this week
- ☆31Mar 18, 2022Updated 4 years ago
- R package PCAtest for evaluating the statistical significance of PCA analysis, selecting number of significant PC axes, and testing the c…☆22Oct 18, 2024Updated last year
- scover☆23Nov 3, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Detect doublets in single-cell RNA-seq data☆180Dec 29, 2020Updated 5 years ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆69Jun 4, 2026Updated last month
- ☆25Updated this week
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆34Updated this week
- Framework for image and flow cytometry analysis☆33Mar 17, 2026Updated 4 months ago
- Easy and comprehensive biological network reconstruction and analysis☆38Sep 15, 2025Updated 10 months ago
- Allen Brain Atlas utilities, parsers and data structures☆11Jun 25, 2017Updated 9 years ago