AllenInstitute / NucCellTypes
☆13Updated 6 years ago
Alternatives and similar repositories for NucCellTypes:
Users that are interested in NucCellTypes are comparing it to the libraries listed below
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆28Updated 7 months ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 2 years ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆21Updated 2 years ago
- kallisto index tag extractor☆20Updated 5 years ago
- Non-official Git repository for R package cellrangerRkit (currently not available elsewhere; I'm not affiliated with 10x)☆19Updated 5 years ago
- Collection of useful methods for single cell analysis☆14Updated 7 months ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- Differential ATAC-seq toolkit☆27Updated last year
- pipelines to process scRNA-seq data☆11Updated 4 years ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆28Updated 5 years ago
- zero-inflated negative binomial gene expression in R☆20Updated 7 years ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Detecting Aberrant Splicing Events from RNA-sequencing data☆16Updated 3 months ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- Bead-based single-cell atac processing☆31Updated 3 years ago
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆19Updated last year
- R package for benchmarking single cell analysis methods☆31Updated last year
- Single-cell Scalable Visualization and Analytics☆25Updated 6 years ago
- distinct: a method for differential analyses via hierarchical permutation tests☆11Updated last year
- An R package for multi-dimensional pathway enrichment analysis☆16Updated 4 months ago
- Isoform co-usage networks from single-cell RNA-seq data☆15Updated last year
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- Workshop for CNV analysis with Bioconductor☆17Updated 2 months ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆25Updated last year
- Transcript quantification import with automatic metadata detection☆67Updated last month