tudaga / LabelCorrectionLinks
Python code for cross-condition label refinement in single-cell data with HiDDEN
☆14Updated last year
Alternatives and similar repositories for LabelCorrection
Users that are interested in LabelCorrection are comparing it to the libraries listed below
Sorting:
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆17Updated last year
- A modular tool for proportion analysis in single-cell sequencing data☆23Updated 2 months ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 8 months ago
- ☆21Updated 4 months ago
- R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA…☆13Updated last year
- Cell-type Relationship Analysis Workflow Done Across Distances☆37Updated 2 weeks ago
- ☆30Updated 3 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 3 years ago
- R package to infer multicellular programs from single-cell data using multi-omics factor analysis (MOFA)☆11Updated 2 years ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆56Updated 3 years ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆30Updated 2 years ago
- R package for generalized binary covariance decomposition.☆11Updated 4 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆29Updated 3 years ago
- Code, data and analysis for moslin.☆15Updated last year
- ☆13Updated last year
- ☆30Updated 7 months ago
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆21Updated last month
- Spatial One☆29Updated last year
- Querying cellular states and programs by learning representations of gene sets☆14Updated last month
- RNA-velocity informed embeddings for visualizing cellular trajectories☆44Updated 3 years ago
- ☆13Updated 3 months ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆20Updated last year
- Landscape Single Cell Entropy☆21Updated 5 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year
- Custom codes accompanying single cell spatial transcriptomic study on the healthy human lung☆12Updated last year
- A record of the analysis pipelines used to create the HTAPP data☆33Updated 7 months ago
- R package that performs sparse factor analysis and differential gene expression discovery simultaneously on single-cell CRISPR screening …☆22Updated 2 years ago
- ☆21Updated last month
- NicheDE is a method that detects context dependent changes in gene expression in spatial transcriptomic data.☆23Updated 5 months ago
- ☆23Updated 2 years ago