tudaga / LabelCorrectionLinks
Python code for cross-condition label refinement in single-cell data with HiDDEN
☆13Updated 11 months ago
Alternatives and similar repositories for LabelCorrection
Users that are interested in LabelCorrection are comparing it to the libraries listed below
Sorting:
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆15Updated last year
- ☆14Updated 2 months ago
- Code, data and analysis for moslin.☆14Updated 10 months ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 5 months ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆29Updated 2 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- ☆22Updated 2 years ago
- RNA-velocity informed embeddings for visualizing cellular trajectories☆44Updated 2 years ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆53Updated 2 years ago
- Integrating temporal gene expression modalities for trajectory inference and disease prediction☆10Updated 2 years ago
- ☆29Updated 3 years ago
- ☆40Updated last week
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 6 months ago
- Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics☆41Updated last week
- Spatiotemporal single-cell RNA sequencing of developing hearts reveals interplay between cellular differentiation and morphogenesis☆13Updated last year
- CAST package☆40Updated 9 months ago
- ☆29Updated 5 months ago
- ☆56Updated last year
- ☆29Updated 3 months ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Updated last year
- ☆20Updated last month
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆13Updated 10 months ago
- A repository for benchmarking spatial deconvolution and mapping tools☆34Updated 3 months ago
- Spatial direct messaging detected by bivariate Moran☆27Updated last month
- Spatial One☆28Updated 9 months ago
- R package that performs sparse factor analysis and differential gene expression discovery simultaneously on single-cell CRISPR screening …☆22Updated last year
- R package for generalized binary covariance decomposition.☆10Updated last month
- A record of the analysis pipelines used to create the HTAPP data☆33Updated 4 months ago
- R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA…☆13Updated 10 months ago
- Independent Component Analysis decipher functional modules for better cell clustering and annotation☆16Updated 3 years ago