Alternatives and similar repositories for LabelCorrection

Users that are interested in LabelCorrection are comparing it to the libraries listed below

• davidliwei / PS
  Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…
  ☆15Updated last year
• quadbio / organoid_regulomes
  Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids
  ☆28Updated last year
• immunogenomics / starCAT
  Implements *CellAnnotator (aka *CAT/starCAT), annotating scRNA-Seq with predefined gene expression programs
  ☆23Updated last month
• MarioniLab / StabMap
  Mosaic single cell data integration using non-overlapping features
  ☆37Updated 2 years ago
• hsmaan / Iniquitate
  Analysis of imbalanced data and its impacts in a scRNA-seq integration setting
  ☆30Updated 4 months ago
• theislab / moslin
  Code, data and analysis for moslin.
  ☆13Updated 9 months ago
• ajaynadig / TRADEtools
  ☆26Updated 4 months ago
• CamaraLab / ConDecon
  R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA…
  ☆13Updated 8 months ago
• stephenslab / gbcd
  R package for generalized binary covariance decomposition.
  ☆10Updated this week
• QihuangZhang / CeLEry
  CeLEry: cell location recovery in single-cell RNA sequencing
  ☆35Updated 5 months ago
• sdentro / copykat_pipeline
  ☆13Updated last year
• pachterlab / FGP_2024
  ☆14Updated last month
• soumelis-lab / ICELLNET
  ☆20Updated this week
• limin321 / stmut
  Visualizing Somatic Alterations of 10X Spatial Transcriptomics Data
  ☆12Updated 8 months ago
• qingnanl / gsdensity
  ☆9Updated last year
• zhang-bin-98 / A-spatial-transcriptome-landscape-of-mouse-aging
  ☆13Updated 8 months ago
• WWXkenmo / ICAnet
  Independent Component Analysis decipher functional modules for better cell clustering and annotation
  ☆16Updated 3 years ago
• kkdey / GSSG
  Gene Set + S2G strategy annotations analyzed for disease architecture
  ☆52Updated 2 years ago
• AmandaKedaigle / OrganoidAtlas
  Code to go along with https://doi.org/10.1016/j.cell.2022.09.010
  ☆21Updated 3 years ago
• immunogenomics / GeNA
  Genotype-Neighborhood Associations: A tool for identifying genetic variant associations to the abundance of cell states in single-cell d…
  ☆14Updated 9 months ago
• wanglab-broad / CAST
  CAST package
  ☆40Updated 8 months ago
• dyxmvp / Spatial_ATAC-seq
  ☆22Updated 2 years ago
• LungCellAtlas / scRNAseq_pipelines
  Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas
  ☆37Updated 4 years ago
• raphael-group / CalicoST
  Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics
  ☆39Updated 2 weeks ago
• theislab / cross_system_integration
  ☆13Updated 3 weeks ago
• Jiaxin-Fan / MuSiC2
  cell type deconvolution for multi-condition bulk RNA-seq data
  ☆27Updated 3 years ago
• satijalab / Mixscale
  ☆19Updated 2 months ago
• Sanofi-Public / spatialone-pipeline
  Spatial One
  ☆28Updated 8 months ago
• XZouProjects / scCODE
  The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data
  ☆13Updated last year
• SunXQlab / scMLnet
  Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks
  ☆26Updated 3 years ago