Alternatives and similar repositories for finer-tsne

Users that are interested in finer-tsne are comparing it to the libraries listed below

• dkobak / finer-tsne
  Code for the paper on t-SNE with variable degree of freedom
  ☆25Updated 5 years ago
• isaacrob / treesne
  ☆63Updated 5 years ago
• KlugerLab / pyFIt-SNE
  Python Wrapper for FIt-SNE
  ☆45Updated 4 years ago
• kundajelab / seqdataloader
  Sequence data label generation and ingestion into deep learning models
  ☆11Updated 4 years ago
• sirajulsalekin / DeepSNR
  Base-pair resolution detection of transcription factor binding site by deep deconvolutional network
  ☆10Updated 8 years ago
• canzarlab / JVis-learn
  ☆20Updated 4 years ago
• KrishnaswamyLab / graphtools
  Tools for building and manipulating graphs in Python
  ☆45Updated last month
• flo-compbio / monet
  Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces
  ☆40Updated 4 years ago
• p-koo / deepomics
  deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis
  ☆22Updated 2 years ago
• jssong-lab / maxEnt
  ☆11Updated 8 years ago
• pachterlab / CBP_2021
  ☆16Updated 4 years ago
• srp33 / ShinyLearner
  ShinyLearner: a software framework for performing benchmarks of machine-learning classification algorithms
  ☆18Updated 4 years ago
• gagneurlab / concise
  Concise: Keras extension for regulatory genomics
  ☆35Updated 2 years ago
• hetio / xswap
  Python library (C++ backend) for degree-preserving network randomization
  ☆14Updated 6 years ago
• theislab / deepflow
  This code contains the neural network implementation from the nature communication manuscript NCOMMS-16-25447A.
  ☆33Updated 7 years ago
• damithsenanayake / SONG
  This Repository Contains the Source Code for the Python Implementation of Self Organizing Nebulous Growths
  ☆23Updated 2 years ago
• fabriziocosta / GraphEmbed
  Compute a 2D embedding of a data matrix given supervised class information.
  ☆12Updated 6 years ago
• hammerlab / cytokit
  Microscopy Image Cytometry Toolkit
  ☆114Updated 3 years ago
• RGLab / scamp
  Implementation of Selective Clustering Annotated using Modes of Projections
  ☆11Updated 5 years ago
• greenelab / DAPS
  Denoising Autoencoders for Phenotype Stratification
  ☆42Updated 7 years ago
• ramzan1990 / sequence2vec
  ☆21Updated 8 years ago
• Nicola17 / High-Dimensional-Inspector
  Scalable analysis of large high-dimensional data
  ☆66Updated 6 years ago
• hammerlab / t-cell-relation-extraction
  Literature mining for T cell relations
  ☆23Updated 3 years ago
• GGiecold-zz / ECLAIR
  Robust and scalable inference of cell lineages via consensus clustering. Features novel algorithms for the comparison of weighted graphs …
  ☆14Updated 8 years ago
• krassowski / gsea-api
  Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)
  ☆16Updated 2 years ago
• wenjiegroup / BiRen
  ☆13Updated 6 years ago
• ismms-himc / codex_dashboard
  Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data
  ☆17Updated 2 years ago
• ppsp-team / StratiPy
  Graph regularized nonnegative matrix factorization (GNMF) in Python
  ☆46Updated 5 years ago
• PMBio / limix
  We have moved to https://github.com/limix/limix.
  ☆23Updated 8 years ago
• vals / python-gprofiler
  ☆13Updated 6 years ago