single-cell-genetics / singlecell_neuroseq_paperLinks
Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation
☆22Updated last year
Alternatives and similar repositories for singlecell_neuroseq_paper
Users that are interested in singlecell_neuroseq_paper are comparing it to the libraries listed below
Sorting:
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆47Updated 2 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 3 years ago
- This repository contains HCA Benchmarking codes☆26Updated 6 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 6 years ago
- R package for Flexible dot plots☆29Updated 3 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated 2 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- ☆39Updated 4 months ago
- Cluster Identity Predictor (R package implementation)☆21Updated 3 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆44Updated 3 years ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆15Updated 6 months ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 4 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆40Updated 4 years ago
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆25Updated 5 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆58Updated 3 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆44Updated 4 years ago
- Single-cell Case Control Analysis☆52Updated last month
- ☆43Updated 5 years ago
- Bead-based single-cell atac processing☆33Updated 4 years ago
- Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression☆15Updated last year
- ☆20Updated 5 months ago
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆75Updated 2 years ago
- ☆29Updated 2 years ago
- Single-cell Orientation Tracing☆22Updated 3 years ago
- A clusterability measure for scRNA-seq data.☆18Updated 3 years ago
- CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq☆23Updated last year
- ☆28Updated 6 years ago
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 4 years ago
- Analysis code for "Perturbation-response genes reveal signaling footprints in cancer gene expression"☆20Updated 7 years ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆21Updated 2 years ago