single-cell-genetics / singlecell_neuroseq_paperLinks
Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation
☆21Updated last year
Alternatives and similar repositories for singlecell_neuroseq_paper
Users that are interested in singlecell_neuroseq_paper are comparing it to the libraries listed below
Sorting:
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated last year
- Analysis code for "Perturbation-response genes reveal signaling footprints in cancer gene expression"☆20Updated 7 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- Bead-based single-cell atac processing☆33Updated 3 years ago
- ☆41Updated 4 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated last year
- Single-cell Case Control Analysis☆50Updated 8 months ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 3 years ago
- ☆34Updated last year
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆15Updated 2 weeks ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆20Updated last year
- ☆12Updated 5 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- GLASS consortium☆13Updated 3 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 3 years ago
- Single-cell Orientation Tracing☆21Updated 3 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆43Updated 4 years ago
- ☆20Updated last year
- Single Cell Epigenome-based Inference of Activity☆19Updated last year
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆39Updated 3 years ago
- ☆22Updated last year
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆23Updated 5 years ago
- Pairwise Hierarchical Model☆19Updated 3 years ago
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Updated 5 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- Cluster Identity Predictor (R package implementation)