lidaof / modbedtoolsLinks
A python command line tool to generate modbed files for visualization on WashU Epigenome Browser
☆10Updated last year
Alternatives and similar repositories for modbedtools
Users that are interested in modbedtools are comparing it to the libraries listed below
Sorting:
- ☆23Updated 5 months ago
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆34Updated 5 months ago
- Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.☆45Updated 2 weeks ago
- modPhred is a pipeline for detection of DNA/RNA modifications from raw ONT data☆16Updated last year
- Dot: An interactive dot plot viewer for comparative genomics☆34Updated 2 years ago
- WDL workflows for variant calling and assembly using ONT☆36Updated this week
- MethPhaser: methylation-based haplotype phasing of human genomes☆49Updated 6 months ago
- Automated Detection and Qualification of Differential Methylation☆14Updated last year
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆34Updated 2 years ago
- ☆28Updated 2 years ago
- Snakemake pipeline to analyze transposable element 'omics data.☆27Updated last week
- Fully automated generation of UCSC assembly hubs☆34Updated last year
- Genome Annotation Without Nightmares☆46Updated 8 months ago
- Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, and synteny to closely related species.☆24Updated 6 years ago
- CAncer Standards Long-read Evaluation☆28Updated 7 months ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆38Updated 2 years ago
- perSVade: personalized Structural Variation detection☆40Updated 3 weeks ago
- Methylmap is a tool for visualization of modified nucleotide frequencies for large cohort sizes.☆21Updated 7 months ago
- Set of tools to manipulate and visualize modified base bam files☆56Updated 3 years ago
- ☆21Updated 9 months ago
- Merge transcriptome read-to-genome alignments into non-redundant transcript models☆18Updated last year
- A set of workflows written in Nextflow for Genome Annotation.☆45Updated last year
- A battery of methylation tools for PacBio HiFi reads☆42Updated 3 weeks ago
- Short Tandem Repeat disease loci resource☆22Updated last week
- FamDB file format library and utilities☆31Updated last month
- ☆31Updated last year
- DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets☆30Updated 2 years ago
- A tutorial on structural variant calling for short read sequencing data☆39Updated 11 months ago
- read and analyse RepeatMasker output☆25Updated 2 years ago
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated 9 months ago