jorgenunezsiri / accusynLinks
AccuSyn: An Accurate Web-based Genome Synteny Browser
☆16Updated last year
Alternatives and similar repositories for accusyn
Users that are interested in accusyn are comparing it to the libraries listed below
Sorting:
- A JBrowse plugin to view multiple alignment format (MAF) files☆27Updated 2 years ago
- Genome assembly soft-masking using Red (REpeat Detector)☆18Updated 6 years ago
- Just Annotate My Genome☆19Updated last year
- Dot: An interactive dot plot viewer for comparative genomics☆34Updated 2 years ago
- A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, a…☆16Updated last year
- A tool for recovering synteny blocks from multiple alignment☆32Updated 4 years ago
- scripts to parse and analyse MCScanX collinearity output☆32Updated 5 years ago
- ☆28Updated 2 years ago
- Simultaneous multi-sample transcript assembler for RNA-seq data☆17Updated 11 months ago
- interactive Multi Objective K-mer Analysis☆23Updated 2 years ago
- Improved Phased Assembler☆28Updated 3 years ago
- Ancestry and haplotype aware simulation of genotypes and phenotypes for complex trait analysis☆24Updated last month
- Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), ad…☆33Updated 5 years ago
- convert a blast output to a bed file☆12Updated 10 years ago
- Scaffolding with assembly likelihood optimization☆21Updated 4 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆30Updated 3 years ago
- PERF is an Exhaustive Repeat Finder☆34Updated 4 years ago
- curPrimers is a tool for trimming primer sequences from amplicon based NGS reads☆17Updated 5 months ago
- ☆16Updated 7 years ago
- Accurate Typing of Human Leukocyte Antigen (HLA) by Oxford Nanopore Sequencing☆17Updated 7 years ago
- Gap2Seq is a gap filling and insertion genotyping tool.☆22Updated last year
- transposable element typing pipeline☆19Updated last year
- Human pan-genome analysis pipeline☆31Updated 5 years ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Updated last year
- Taxon-aware analysis of clustered protein sequences☆31Updated last year
- modPhred is a pipeline for detection of DNA/RNA modifications from raw ONT data☆16Updated last year
- Command line tool to plot genomic coverage from a BAM file☆14Updated 2 years ago
- a versatile toolkit for processing and analyzing diverse types of sequence data☆21Updated 11 months ago
- WGS (Wheat) Robust Assembly Pipeline☆22Updated 4 years ago
- Generating UTRs from SHort Reads☆12Updated 5 years ago