AccuSyn: An Accurate Web-based Genome Synteny Browser
☆16Aug 27, 2024Updated last year
Alternatives and similar repositories for accusyn
Users that are interested in accusyn are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Apr 30, 2026Updated last week
- Interactive eQTL visualizations☆14Dec 12, 2022Updated 3 years ago
- ☆11Feb 20, 2024Updated 2 years ago
- Identifying large scale inversions between two genomes by mapping genome 1's unique kmers onto genome 2.☆10Jun 6, 2025Updated 11 months ago
- A command line tool (in Kotlin/JVM) for intuitively visualizing BAM alignments. (Currently unmaintained)☆11Jan 7, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A JBrowse 1 plugin to view multiple alignment format (MAF) files☆27Oct 25, 2023Updated 2 years ago
- ☆42Apr 19, 2026Updated 2 weeks ago
- convert CHAIN format to PAF format☆15Dec 17, 2024Updated last year
- Everything but the kitchen sink☆13Feb 6, 2025Updated last year
- ☆29Mar 5, 2024Updated 2 years ago
- Galaxy Docker Image with Tools for Genome Annotation☆12Apr 20, 2021Updated 5 years ago
- A novel algorithm with high detection power for BSA-Seq data analysis - the significant structural variant method☆36Aug 1, 2025Updated 9 months ago
- Scripts to split reference and run mummer in parallel on an SGE cluster☆11Oct 14, 2016Updated 9 years ago
- a programme for visualization of short sequence alignment and path navigation in graphical pan-genome☆26Jan 23, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Genome assembly soft-masking using Red (REpeat Detector)☆18Dec 7, 2018Updated 7 years ago
- Find and visualize rearrangements in DNA sequences☆55Updated this week
- ☆25Mar 22, 2016Updated 10 years ago
- a precise pangenome browser combining linear and graph-based pan-genome☆13Jul 16, 2024Updated last year
- ☆12Apr 10, 2021Updated 5 years ago
- Scripts to do haplotype analysis on pan genomes.☆20Sep 24, 2020Updated 5 years ago
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- Transposable Elements Representation Learner (TERL)☆19Jun 2, 2025Updated 11 months ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Dec 7, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- This is a library C/Python/CLI for working with TAF (.taf,.taf.gz) and MAF (.maf) alignment files☆32May 1, 2026Updated last week
- Overlapped primer design for entire coding sequence of the gene with specificity check☆13Feb 22, 2022Updated 4 years ago
- xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …☆11Oct 21, 2020Updated 5 years ago
- Genome annotation pre-publication results☆27May 1, 2026Updated last week
- Improving gene isoform quantification with miniQuant☆41Jan 13, 2026Updated 3 months ago
- visualising sequence similarity with Circos☆41Jul 1, 2019Updated 6 years ago
- CViTjs - Chromosome Viewing Tool. A javascript tool for quick whole-genome views of data.☆11Jan 15, 2021Updated 5 years ago
- Catalogue of pairwise alignment algorithms and benchmarks☆25Jan 6, 2026Updated 4 months ago
- Structural Variants Pipeline for Long Reads☆44Jul 17, 2018Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Tool for exploring sequence alignment algorithms☆14Aug 30, 2024Updated last year
- base-level dotplots from PAF alignments☆33Sep 18, 2025Updated 7 months ago
- CMOD Wikidata App built on Django Framework for editing Wikidata with existing GeneWIki bot code☆12Feb 3, 2017Updated 9 years ago
- Annotation of cryptic transposon variants using Hidden Markov Models to detect conserved terminal features.☆10May 2, 2026Updated last week
- A program to generate a graph which presents a simplified representation of several full length genomes☆13Aug 23, 2018Updated 7 years ago
- Mutual nearest neighbor graphs for population structure inference and visualization☆18Dec 4, 2025Updated 5 months ago
- Identifies duplicate reads. This tool locates and tags duplicate reads in a coordinate ordered SAM or BAM file.☆20Jan 21, 2026Updated 3 months ago