☆13Jun 24, 2016Updated 10 years ago
Alternatives and similar repositories for rPGA
Users that are interested in rPGA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain☆23Jun 17, 2024Updated 2 years ago
- abPOA: an SIMD-based C library for fast partial order alignment using adaptive band☆15Jul 20, 2023Updated 2 years ago
- ☆21Nov 1, 2019Updated 6 years ago
- Discrete Distributional Differential Expression☆23Jan 3, 2019Updated 7 years ago
- CLIP-seq Analysis of Multi-mapped reads☆32Jul 20, 2021Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ARCHIVED☆11May 10, 2022Updated 4 years ago
- Long Approximate Matches-based Split Aligner☆13Apr 6, 2017Updated 9 years ago
- A Weighted Exact Test for Mutually Exclusive Mutations in Cancer☆21Sep 30, 2018Updated 7 years ago
- ☆20Nov 17, 2025Updated 7 months ago
- Dynamic time warping of Oxford Nanopore squiggle data to characterize tandem repeats.☆32Jul 2, 2020Updated 6 years ago
- Benchmark on adaptive banded algorithm☆19Feb 26, 2023Updated 3 years ago
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Oct 5, 2017Updated 8 years ago
- personal genome constructor☆11May 29, 2025Updated last year
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Aug 4, 2017Updated 8 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Isoform-level expression patterns in single-cell RNA-sequencing data☆12Apr 20, 2023Updated 3 years ago
- ☆18Jul 9, 2018Updated 7 years ago
- ☆18Jan 17, 2019Updated 7 years ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- Training material for intermediate R / Bioconductor courses☆17Mar 15, 2023Updated 3 years ago
- MultiBreak-SV identifies structural variants from next-generation paired end data, third-generation long read data, or data from a combin…☆12Jul 19, 2016Updated 9 years ago
- Variant Calling for the HPRC2☆16May 26, 2026Updated last month
- A long-read analysis toolbox for cancer and population genomics☆23Jul 1, 2025Updated last year
- Easily draw publication-quality figures of splicing quantitative trait loci☆16Feb 2, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- mitochondrial variant analysis tools☆15Mar 4, 2021Updated 5 years ago
- Identifying large scale inversions between two genomes by mapping genome 1's unique kmers onto genome 2.☆10Jun 6, 2025Updated last year
- ☆62Aug 4, 2020Updated 5 years ago
- An RNA pipeline built on top of ADAM. Apache 2 licensed.☆19Jan 19, 2018Updated 8 years ago
- A command line program for large scale buffering between piped programs☆17Nov 19, 2021Updated 4 years ago
- Materials for GCB535 at Penn.☆21Apr 19, 2019Updated 7 years ago
- Telomerecat: The telomere computational analysis tool☆14Oct 9, 2020Updated 5 years ago
- A command line tool (in Kotlin/JVM) for intuitively visualizing BAM alignments. (Currently unmaintained)☆11Jan 7, 2024Updated 2 years ago
- COMETgazer mehylation analysis software suite☆10Jul 21, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆15Nov 9, 2018Updated 7 years ago
- A mosaic genome painting tool for plant genomes☆18May 6, 2026Updated last month
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago
- Add functional variant annotation to MAF file☆11Nov 20, 2024Updated last year
- deSALT - De Bruijn graph-based Spliced Aligner for Long Transcriptome reads☆44Sep 5, 2022Updated 3 years ago
- Collection of simple C scripts for parsing vcf or bam files using the htslib C library. These scripts can be used as the starting point f…☆11Dec 11, 2020Updated 5 years ago
- ☆19Jun 11, 2025Updated last year