structure detection program
☆18Nov 20, 2024Updated last year
Alternatives and similar repositories for GenomonSV
Users that are interested in GenomonSV are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- an empirical Bayesian framework for mutation detection from cancer genome sequencing data☆31Apr 5, 2016Updated 10 years ago
- detection of mutations causing splicing change☆13Oct 6, 2022Updated 4 years ago
- SV detection tool for nanopore sequence reads☆99Mar 25, 2026Updated 7 months ago
- Genomic Visualization Catalog☆13Oct 6, 2022Updated 4 years ago
- paplot creates various dynamic and interactive reports for cancer genome analysis.☆26Feb 1, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- RAPTR-SV uses Read Pair and Split Read methods to identify structural variants in paired-end WGS data☆10Aug 18, 2016Updated 10 years ago
- iAnnotateSV is a Python library and command-line software toolkit to annotate and visualize structural variants detected from Next Genera…☆16Jun 11, 2026Updated 4 months ago
- SV clustering☆32Jul 5, 2021Updated 5 years ago
- GRIDSS: the Genomic Rearrangement IDentification Software Suite☆286May 21, 2025Updated last year
- Translocator: local realignment and global remapping enabling accurate translocation detection using single-molecule sequencing long read…☆12Jan 22, 2020Updated 6 years ago
- Published at Bioinformatics☆12Jul 4, 2024Updated 2 years ago
- A bioinformatics tool for SV detection and virus integration discovery☆21Sep 12, 2017Updated 9 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆38Aug 9, 2019Updated 7 years ago
- ☆13Jan 23, 2020Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Integrated Variant Caller☆17Mar 15, 2018Updated 8 years ago
- Texomer: Integrating Analysis of Cancer Genome and Transcriptome Sequencing Data☆21Aug 19, 2020Updated 6 years ago
- Tools to gather evidence for structural variation via breakpoint detection.☆20Mar 27, 2026Updated 7 months ago
- ☆11Apr 25, 2024Updated 2 years ago
- A wrapper for calling small variants from human germline high-coverage single-sample Illumina data☆14Jul 21, 2019Updated 7 years ago
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Apr 18, 2019Updated 7 years ago
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆28Sep 9, 2026Updated last month
- ☆11May 27, 2025Updated last year
- A read alignment visualization library for long reads☆10Aug 6, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Genome-wide reconstruction of complex structural variants☆39Jun 21, 2022Updated 4 years ago
- Hemang Parikh☆11Jan 12, 2016Updated 10 years ago
- HapMuC: Somatic Mutation Calling Using Heterozygous Germ Line Variants Near Candidate Mutations (Bioinformatics)☆10Jun 7, 2015Updated 11 years ago
- Bam Read Index - Extract alignments from a bam file by readname☆29Apr 22, 2024Updated 2 years ago
- sort genomic data☆36Oct 21, 2026Updated last week
- Visualize next generation sequencing reads over putative structural variants☆13Aug 25, 2014Updated 12 years ago
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Aug 19, 2022Updated 4 years ago
- ☆15Jan 19, 2018Updated 8 years ago
- Approach to identify simple and complex structural genomic rearrangements using a randomized approach☆21Nov 14, 2018Updated 7 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Detects human contamination in bam files☆16Sep 10, 2020Updated 6 years ago
- A long-read analysis toolbox for cancer and population genomics☆23Jul 1, 2025Updated last year
- The Modular Aligner and The Modular SV Caller☆47Jul 18, 2023Updated 3 years ago
- Multiple sequence alignment browser☆12Dec 12, 2022Updated 3 years ago
- Structural Variant Prediction Viewer☆36Jul 19, 2017Updated 9 years ago
- ☆15Feb 6, 2021Updated 5 years ago
- Structural variant detection and association testing☆109Feb 2, 2023Updated 3 years ago