JBrowse 1.x Plugin Registry
☆14Sep 10, 2023Updated 2 years ago
Alternatives and similar repositories for jbrowse-registry
Users that are interested in jbrowse-registry are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- JBrowse plugin that supports smallRNA alignments☆12Apr 8, 2019Updated 7 years ago
- JBrowse plugin for methylation related things☆16Oct 9, 2018Updated 7 years ago
- All JBrowse plugins created by Brigitte Hofmeister☆10Apr 27, 2018Updated 7 years ago
- A JBrowse plugin for plotting multiple bigwig subtracks☆12Feb 13, 2022Updated 4 years ago
- OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.☆22Dec 1, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A JBrowse plugin for creating sashimi or junction style plots from RNA-seq data☆14Apr 30, 2021Updated 4 years ago
- Docker image of JBrowse Genome Browser☆15Apr 12, 2021Updated 5 years ago
- Very very long reads, indeed☆13Apr 30, 2017Updated 8 years ago
- Nextflow DSL2 pipeline to generate data for a BlobToolKit analysis. This workflow is part of the Tree of Life production suite.☆15Updated this week
- Scripts to split reference and run mummer in parallel on an SGE cluster☆11Oct 14, 2016Updated 9 years ago
- Estimation of isoelectric point of peptides and proteins using support vector machines (SVM).☆10Sep 10, 2016Updated 9 years ago
- defusion☆14Aug 24, 2021Updated 4 years ago
- "The who the what the huh?" is our pipeline for converting bcl files to fastq and performing QC.☆11Sep 19, 2022Updated 3 years ago
- Scaffolding with assembly likelihood optimization☆21Dec 14, 2020Updated 5 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A JBrowse plugin for viewing GWAS data☆13Feb 13, 2022Updated 4 years ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆50Jun 27, 2020Updated 5 years ago
- Multiple sequence alignment browser☆11Dec 12, 2022Updated 3 years ago
- WGS (Wheat) Robust Assembly Pipeline☆22Sep 4, 2021Updated 4 years ago
- Hagfish - assess an assembly through creative use of coverage plots☆36Aug 9, 2012Updated 13 years ago
- succinct labeled graphs with collections and paths☆15Nov 18, 2018Updated 7 years ago
- a pileup library that embraces the huge☆43Oct 2, 2020Updated 5 years ago
- A high-performance search engine for large-scale genomic interval datasets☆20Sep 1, 2021Updated 4 years ago
- Multi-sample transcriptome assembly from RNA-Seq☆25Jun 10, 2018Updated 7 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- ☆26Oct 31, 2019Updated 6 years ago
- Nanopore desc☆18Aug 22, 2016Updated 9 years ago
- 🔝 The amazing Galaxy Tour Builder web extension. // See demo 👉☆17Jun 2, 2020Updated 5 years ago
- sort genomic data☆36Nov 7, 2025Updated 5 months ago
- Gene Ontology subgraph visualizations☆20Jan 6, 2026Updated 3 months ago
- Provides easy read/write access to genomic tracks☆22Mar 18, 2016Updated 10 years ago
- Identifying large scale inversions between two genomes by mapping genome 1's unique kmers onto genome 2.☆10Jun 6, 2025Updated 10 months ago
- A command line program for large scale buffering between piped programs☆17Nov 19, 2021Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A command line tool (in Kotlin/JVM) for intuitively visualizing BAM alignments. (Currently unmaintained)☆11Jan 7, 2024Updated 2 years ago
- R package for InterMine☆18Apr 5, 2022Updated 4 years ago
- A varitation graph tool☆10Dec 23, 2019Updated 6 years ago
- A mosaic genome painting tool for plant genomes☆18Mar 4, 2025Updated last year
- JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.☆473Mar 9, 2026Updated last month
- DMR Identification Tool☆34Jul 6, 2023Updated 2 years ago
- Scaffolding with RNA-seq read alignment☆21Jul 10, 2018Updated 7 years ago