Alternatives and similar repositories for methylasso

Users that are interested in methylasso are comparing it to the libraries listed below

• luciorq / isoformic
  Isoform-level functional RNA-Seq analysis 🧬
  ☆35Updated last month
• KolmogorovLab / minda
  ☆26Updated 8 months ago
• sanjaynagi / rna-seq-pop
  Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
  ☆18Updated 8 months ago
• Kuanhao-Chao / OpenSpliceAI
  🤖 Open‑source deep-learning-based splice‑site predictor that decodes splicing patterns across species
  ☆31Updated last week
• sartorlab / methylSig
  R package for DNA methylation analysis
  ☆19Updated last year
• tkzeng / GeneBayes
  ☆29Updated 6 months ago
• EI-CoreBioinformatics / portcullis
  Splice junction analysis and filtering from BAM files
  ☆42Updated 3 years ago
• seqcode / allo
  Allo: a multi-mapped read rescue strategy for gene regulatory analyses
  ☆24Updated last year
• alejandrogzi / gtfsort
  a lexicographically-based GTF/GFF sorter
  ☆37Updated 7 months ago
• mgaleyuw / MeOW
  Automated Detection and Qualification of Differential Methylation
  ☆14Updated 2 years ago
• alevar / tiebrush
  Summarize and filter read alignments from multiple sequencing samples (taken as sorted BAM files)
  ☆17Updated 2 months ago
• pachterlab / splitcode
  Flexible and efficient parsing, interpreting and editing of sequencing reads
  ☆44Updated last week
• guigolab / bamstats
  A command line tool to compute mapping statistics from a BAM file
  ☆25Updated 3 years ago
• COMBINE-lab / grouper
  ☆16Updated 6 years ago
• YingZhou001 / Immuannot
  Immuological gene typing and annotation for genome assembly
  ☆38Updated 9 months ago
• Gregor-Mendel-Institute / bookend
  End-guided RNA assembler
  ☆15Updated 2 weeks ago
• js2264 / tidyCoverage
  ☆23Updated last month
• Oshlack / MINTIE
  Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.
  ☆37Updated last year
• cortes-ciriano-lab / ReConPlot
  ☆24Updated last year
• XiDsLab / TAGET
  ☆20Updated 3 years ago
• fulcrumgenomics / fgsv
  Tools to gather evidence for structural variation via breakpoint detection.
  ☆19Updated this week
• anonconda / TranSuite
  A software suite for accurate identification, annotation, translation, and feature characterization of annotate transcripts.
  ☆20Updated 4 years ago
• Augroup / miniQuant
  Improving gene isoform quantification with miniQuant
  ☆30Updated 2 months ago
• cancerit / telomerecat
  Telomerecat: The telomere computational analysis tool
  ☆21Updated 4 years ago
• drostlab / myTAI
  Evolutionary Transcriptomics with R
  ☆49Updated last month
• smithlabcode / abismal
  Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.
  ☆20Updated 3 weeks ago
• kgori / sigfit
  Flexible Bayesian inference of mutational signatures
  ☆38Updated 2 years ago
• cpockrandt / PhyloCSFpp
  PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…
  ☆31Updated 3 years ago
• Oshlack / Slinker
  Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.
  ☆19Updated 3 years ago
• WGLab / LongGF
  A computational algorithm and software tool for fast and accurate detection of gene fusion by long-read transcriptome sequencing
  ☆21Updated 4 years ago