koadman / mauveLinks
A genome alignment and visualization system
☆32Updated 5 years ago
Alternatives and similar repositories for mauve
Users that are interested in mauve are comparing it to the libraries listed below
Sorting:
- Automatically exported from code.google.com/p/prottest3☆37Updated 8 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.☆69Updated 2 months ago
- STAG: Species Tree from All Genes☆35Updated 7 years ago
- Pangenome analysis of eukaryotes.☆21Updated 5 years ago
- MFannot is a program for the annotation of mitochondrial and plastid genomes☆22Updated 2 years ago
- A high performance tool to identify orthologs and paralogs across genomes.☆27Updated 2 years ago
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆41Updated last year
- HyPhy standalone analyses☆52Updated last month
- ☆35Updated 5 years ago
- TSEBRA: Transcript Selector for BRAKER☆49Updated 2 months ago
- Improve the quality of a denovo assembly by scaffolding and gap filling☆57Updated 5 years ago
- Protein hint generation pipeline for gene finding in eukaryotic genomes☆60Updated 2 years ago
- orthology assignment using phylogenetic and network analyses☆53Updated 2 weeks ago
- tools for assessing the accuracy of genome assemblies☆35Updated last year
- Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads☆64Updated 2 weeks ago
- A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing☆68Updated 4 years ago
- A program for detection of tRNA genes☆83Updated 3 years ago
- ☆53Updated 4 years ago
- HomBlocks: A multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching☆36Updated 8 years ago
- Remove lambda phage reads from a fastq file☆29Updated 3 years ago
- Synteny Imager☆65Updated last month
- A comparative genomics workflow using Nextflow, conda, Julia and R☆49Updated last year
- In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
- paml documentation and tutorials☆68Updated last month
- Phylogeny Enhanded Prediction of PAN-genome☆43Updated 5 years ago
- A nextflow pipeline for decontamination of short reads, long reads and contigs☆55Updated 7 months ago
- A massively parallel tool for model selection and tree inference on thousands of genes☆51Updated last year
- k-mer learning materials☆83Updated 11 months ago
- Convert GFF, fastas, annotation table and species name into Genbank.☆17Updated 3 weeks ago