Sanrrone / GGisyLinks
Genome-Genome circle synteny
☆25Updated last year
Alternatives and similar repositories for GGisy
Users that are interested in GGisy are comparing it to the libraries listed below
Sorting:
- Automatic evaluation of HGTs☆29Updated 4 months ago
- STAG: Species Tree from All Genes☆34Updated 6 years ago
- Dinoflagellate Annotation Workflow☆14Updated 2 years ago
- Pangenome analysis of eukaryotes.☆18Updated 4 years ago
- Small and simple scripts useful for various bioinformatics purposes e.g. extract sequences from fasta files☆20Updated 2 years ago
- ☆32Updated 4 years ago
- PATO is a R package designed to analyze pangenomes (set of genomes) intra or inter species.☆58Updated last year
- Data analysis of Funannotate and Orthofinder outputs to Pangenome results☆19Updated 5 years ago
- An R package to infer and analyze synteny networks from protein sequences☆30Updated 5 months ago
- Multi-genome synteny block visualization tool☆41Updated 4 months ago
- ☆26Updated 4 years ago
- Wrapper for the genoPlotR R package. This wrapper makes phylogeny, genbank files and blast comparisons that is needed for the genoPLotR p…☆14Updated 3 years ago
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆31Updated 4 years ago
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆28Updated last year
- a broadly applicable tool for automated gene identification and retrieval☆31Updated 6 months ago
- R package for comparison of synteny conservation at the genome-wide scale.☆14Updated last year
- A high performance tool to identify orthologs and paralogs across genomes.☆26Updated 2 years ago
- Microbial Genome Circular plotting tool for comparative genomics using Circos☆38Updated 2 years ago
- Mobile Genetic Elements Retrieving Tool☆15Updated last week
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆42Updated 2 months ago
- ContScout sequence contamination filter tool☆20Updated 2 weeks ago
- Quality control plotting for long reads☆10Updated last year
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆27Updated 3 years ago
- pGWAS and functional filtering pipeline to identify candidate adaptive genetic traits in bacteria☆11Updated 7 years ago
- Colinear block visualisation tool☆31Updated last year
- Genome size estimation from long read overlaps☆56Updated last month
- PoSeiDon: positive selection detection and recombination analysis pipeline☆38Updated 3 months ago
- A script for comparing old vs new versions of genome annotations☆21Updated last year
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆26Updated 3 months ago
- tools for assessing the accuracy of genome assemblies☆34Updated last year