BRIG is a cross-platform (Windows/Mac/Linux) application that displays circular comparison images of multiple genomes using BLAST.
☆44Mar 1, 2026Updated this week
Alternatives and similar repositories for BRIG
Users that are interested in BRIG are comparing it to the libraries listed below
Sorting:
- Assign genotypes to Salmonella Paratyphi A isolates using their whole-genome data.☆10Mar 6, 2025Updated last year
- Pipeline for Illumina shotgun sequencing of 16S rRNA amplicon sequences☆14Sep 2, 2016Updated 9 years ago
- A genome alignment and visualization system☆33Nov 15, 2020Updated 5 years ago
- Pangenome analysis of eukaryotes.☆21Sep 21, 2020Updated 5 years ago
- UFCG: Universal Fungal Core Genes☆35Jul 29, 2025Updated 7 months ago
- Phylotype your strains using Clermont's 2013 method: ezclermont.org☆15Aug 5, 2022Updated 3 years ago
- visualising sequence similarity with Circos☆41Jul 1, 2019Updated 6 years ago
- Metagenomic binning suite☆29Sep 30, 2022Updated 3 years ago
- Pneumococcal Capsular Typing tool for NGS data☆18Apr 6, 2021Updated 4 years ago
- ☆68Jul 8, 2016Updated 9 years ago
- The MLST pipeline developed by the PathOGiST research group☆36Nov 29, 2023Updated 2 years ago
- IS mapping software☆57Dec 3, 2021Updated 4 years ago
- Mass screening of contigs for antimicrobial and virulence genes☆481Jan 31, 2026Updated last month
- ☆20Jan 12, 2017Updated 9 years ago
- This RAPT repository has been retired as of December 2024. NCBI's Read assembly and Annotation Pipeline Tool (RAPT) was a pilot service.☆58Apr 1, 2025Updated 11 months ago
- Rapid haploid variant calling and core genome alignment☆569Dec 12, 2025Updated 2 months ago
- ☆38Apr 14, 2022Updated 3 years ago
- This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye…☆58Apr 22, 2021Updated 4 years ago
- Nextflow workflows to assign Salmonella serotype based on Genome similarity using MASH, SOURMASH and KMA.☆13Dec 24, 2025Updated 2 months ago
- A set of scripts for calculating pairwise SNP distance☆44Feb 19, 2026Updated 2 weeks ago
- BRICK creates a BRIG-like interactive data visualisation for bacterial genome annotations and comparisons☆21Dec 9, 2025Updated 2 months ago
- Genome-Genome circle synteny☆25Dec 1, 2023Updated 2 years ago
- Standalone Python re-implementation of the POLCA polisher from MaSuRCA☆44Aug 20, 2025Updated 6 months ago
- Visualisation application for Klebsiella genotypes generated by Kleborate.☆10Sep 27, 2025Updated 5 months ago
- ☆11Aug 6, 2019Updated 6 years ago
- ☆11Mar 10, 2024Updated last year
- scripts for microbiome analysis☆12Jul 25, 2024Updated last year
- A microbial genomic analysis pipeline used by the Djordjevic Lab☆13Feb 9, 2025Updated last year
- Program for finding horizontal gene transfer using BLAST result☆11May 26, 2023Updated 2 years ago
- ☆18Dec 11, 2024Updated last year
- Intelligent and cost-effective bidding on cloud computing instances for bioinformatics pipelines.☆13Dec 8, 2017Updated 8 years ago
- ☆10Jun 9, 2020Updated 5 years ago
- Prediction of apoplastic and cytoplasmic effectors in fungi and oomycetes☆27Jun 7, 2022Updated 3 years ago
- Repo for Proksee Cmd Line Tools☆26Feb 22, 2023Updated 3 years ago
- panISa is a software to search insertion sequence (IS) on resequencing data (bam file)☆24Apr 11, 2024Updated last year
- Bacterial analysis toolbox for full ESKAPE pathogen characterization and profiling the resistome, mobilome, virulome & phylogenomics usin…☆26Jan 30, 2025Updated last year
- Pipeline for analysing intergenic regions in bacteria☆39Oct 25, 2019Updated 6 years ago
- AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and p…☆353Feb 27, 2026Updated last week
- Symmetric DUST for finding low-complexity regions in DNA sequences☆45Jul 24, 2025Updated 7 months ago