happykhan / BRIGLinks
BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data.
☆36Updated 6 years ago
Alternatives and similar repositories for BRIG
Users that are interested in BRIG are comparing it to the libraries listed below
Sorting:
- A tool for drawing ANI clustermap between all-vs-all microbial genomes☆85Updated 3 months ago
- Collection of scripts for bacterial genomics☆48Updated 5 years ago
- A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing☆70Updated 4 years ago
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆73Updated 2 months ago
- GenoVi, an automated customizable circular genome visualizer for bacteria and archaea☆96Updated 2 years ago
- CLI tool to annotate genes with KOfam☆86Updated 2 years ago
- GTDB taxonomy taxdump files with trackable TaxIds☆56Updated 4 months ago
- Bioinformatics tool for Locus Visualisation☆113Updated 3 months ago
- A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category☆71Updated 3 months ago
- ☆75Updated this week
- Python tool to reduce size and redundancy of phylogenetic datasets☆45Updated 2 years ago
- Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes☆88Updated 3 months ago
- Supporting code for uncultivated gut virus manuscript☆73Updated 2 years ago
- MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.☆62Updated last week
- A tool for representing genomic potential and transcriptomic expression into KEGG pathways☆59Updated last year
- A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing☆49Updated 2 months ago
- CGView is a Java package for generating high-quality, zoomable maps of circular genomes.☆48Updated last year
- A pipeline to computationally identify invertible DNA regions and quantify their orientations.☆29Updated last year
- viralVerify: viral contig verification tool☆71Updated 4 years ago
- Perl script for simulating PCR reactions. Extract sequences from a query based on primer sequences.☆47Updated 4 months ago
- Assembly methods for nanopore-based metagenomic sequencing: a comparative study☆18Updated 5 years ago
- A toolkit for prokaryotic comparative genomics☆50Updated 7 months ago
- IS mapping software☆56Updated 3 years ago
- ARG normalization by mapping to the ARO ontology.☆58Updated last month
- Python code for versatile Functional Ontology Assignments for Metagenomes searching via Hidden Markov Model (HMM) with environmental focu…☆59Updated 4 months ago
- nanodisco: a toolbox for discovering and exploiting multiple types of DNA methylation from individual bacteria and microbiomes using nano…☆71Updated 3 years ago
- Improvement of metagenome-assembled genomes☆54Updated 5 years ago
- ☆56Updated last year
- EzAAI - High Throughput Prokaryotic AAI Calculator☆44Updated last month
- Classification of Eukaryotic and Prokaryotic sequences from metagenomic datasets☆74Updated last year