infspiredBAT / Circoletto
visualising sequence similarity with Circos
☆40Updated 5 years ago
Alternatives and similar repositories for Circoletto
Users that are interested in Circoletto are comparing it to the libraries listed below
Sorting:
- Fast k-mer based tool for multi locus sequence typing (MLST)☆44Updated 4 years ago
- Protein Alignment and Detection Interface☆61Updated last year
- Automatically exported from code.google.com/p/prottest3☆36Updated 7 years ago
- A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing☆70Updated 3 years ago
- Repository for scripts and resources used for metagenomics with Nanopore, PacBio and Illumina sequencing☆21Updated 2 years ago
- Split Kmer Analysis☆64Updated 2 years ago
- hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.☆66Updated 4 months ago
- Estimate metagenomic coverage and sequence diversity☆52Updated 9 months ago
- ☆28Updated 4 years ago
- MFannot is a program for the annotation of mitochondrial and plastid genomes☆21Updated last year
- Assembly methods for nanopore-based metagenomic sequencing: a comparative study☆18Updated 5 years ago
- Pangenome analysis of eukaryotes.☆18Updated 4 years ago
- ☆52Updated 4 years ago
- BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…☆34Updated 6 years ago
- A program for detection of tRNA genes☆60Updated 2 years ago
- viralVerify: viral contig verification tool☆69Updated 3 years ago
- This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye…☆58Updated 4 years ago
- Phylogeny Enhanded Prediction of PAN-genome☆40Updated 4 years ago
- CGView is a Java package for generating high-quality, zoomable maps of circular genomes.☆44Updated 10 months ago
- Improve the quality of a denovo assembly by scaffolding and gap filling☆57Updated 4 years ago
- Detection of pseudogene candidates in bacterial and archaeal genomes.☆49Updated last year
- SHOOT.bio - the phylogenetic search engine☆24Updated last year
- GTDB taxonomy taxdump files with trackable TaxIds☆53Updated 2 weeks ago
- tools for assessing the accuracy of genome assemblies☆34Updated last year
- PanPhlAn is a strain-level metagenomic profiling tool for identifying the gene composition of individual strains in metagenomic samples☆45Updated last year
- A toolkit for prokaryotic comparative genomics☆49Updated 3 months ago
- A tool for removing redundant genomes from a set of assemblies☆71Updated last year
- Trim adapters from MGI sequence data☆11Updated last year
- Classification of Eukaryotic and Prokaryotic sequences from metagenomic datasets☆69Updated 11 months ago
- Detection of incorrectly labeled sequences across kingdoms☆85Updated 2 years ago