Alternatives and similar repositories for LEA

Users that are interested in LEA are comparing it to the libraries listed below

• bcm-uga / pcadapt
  Performing highly efficient genome scans for local adaptation with R package pcadapt v4
  ☆42Updated 3 months ago
• pblischak / polyploid-genotyping
  SNP genotyping in polyploids
  ☆17Updated 5 years ago
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆36Updated last year
• emvolz-phylodynamics / treestructure
  ☆18Updated last month
• duchene / phylomad
  ☆19Updated last year
• emvolz / treedater
  Scalable relaxed clock phylogenetic dating
  ☆27Updated 2 months ago
• liamrevell / learnPopGen
  initial commit
  ☆26Updated 2 years ago
• AliTVTeam / AliTV-perl-interface
  ☆11Updated 4 years ago
• macroevolution / bamm
  A program for multimodel inference on speciation and trait evolution
  ☆34Updated 8 years ago
• NovembreLab / PCAviz
  An R package to help in plotting PCA results nicely.
  ☆12Updated 5 years ago
• jgx65 / hierfstat
  the hierfstat package
  ☆25Updated 11 months ago
• kkeenan02 / diveRsity
  diveRsity: A comprehensive, general purpose population genetics analysis package.
  ☆26Updated 7 years ago
• thierrygosselin / radiator
  RADseq Data Exploration, Manipulation and Visualization using R
  ☆59Updated 2 months ago
• vsbuffalo / msr
  Process MS results in R, in a tidy way
  ☆16Updated 7 years ago
• weissmanlab / magic
  Minimal Assumption Genomic Inference of Coalescence
  ☆14Updated 2 years ago
• AgResearch / KGD
  Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment
  ☆21Updated 3 weeks ago
• bwringe / hybriddetective
  ☆15Updated 2 years ago
• StuntsPT / Structure_threader
  A wrapper program to parallelize and automate runs of "Structure", "fastStructure" and "MavericK".
  ☆25Updated 3 months ago
• arzwa / Whale.jl
  Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation
  ☆16Updated 6 months ago
• singhal / popgen_tutorial
  ☆11Updated 6 years ago
• j-a-thia / genomalicious
  A smorgasbord of R functions for performing and teaching population genomic analyses
  ☆19Updated 2 months ago
• stevemussmann / BayesAss3-SNPs
  Modification of BayesAss 3.0.4 to allow handling of large SNP datasets
  ☆17Updated 3 years ago
• mailund / admixture_graph
  Module for analysing admixture graphs
  ☆29Updated 7 years ago
• luntergroup / smcsmc
  Demographic inference from whole genomes
  ☆13Updated 3 years ago
• genomematt / xenomapper
  A utility for splitting mixed origin NGS reads
  ☆10Updated 4 years ago
• bodkan / admixr
  An R package for reproducible and automated ADMIXTOOLS analyses
  ☆34Updated 9 months ago
• gbradburd / SpaceMix
  ☆30Updated 3 years ago
• millanek / fineRADstructure
  A package for population structure inference from RAD-seq data
  ☆34Updated 4 years ago
• FePhyFoFum / PyPHLAWD
  Python version of PHLAWD
  ☆21Updated last year
• augusto-garcia / onemap
  Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…
  ☆38Updated last year