☆13Aug 13, 2024Updated 2 years ago
Alternatives and similar repositories for mirlyn
Users that are interested in mirlyn are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Apr 17, 2025Updated last year
- selbal: selection of balances for microbial signatures☆33Feb 24, 2025Updated last year
- screening metagenomes for arbitrary lineages, using gene-centric assembly methods and phylogenetics☆10Oct 29, 2020Updated 6 years ago
- Aggregate genome coverage☆13Oct 22, 2026Updated 2 weeks ago
- Site that contains musings and code for compositional analysis of high throughput sequencing experiments☆17Apr 18, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Predicting Absolute and Relative Abundance by Modeling Efficiency to Derive Intervals and Concentrations☆15Nov 24, 2025Updated 11 months ago
- Demultiplex Illumina FASTQ files☆10May 23, 2025Updated last year
- ☆20Apr 24, 2025Updated last year
- A Hierarchical Approach to Pangenomics Inference☆13Apr 15, 2024Updated 2 years ago
- ☆15May 3, 2024Updated 2 years ago
- Identifying transcription factor binding sites from neural network contribution scores☆29Aug 26, 2026Updated 2 months ago
- Simple R utilities for working with HMMER☆19Oct 3, 2024Updated 2 years ago
- Creating composite plot using 'aplot'☆10Aug 4, 2026Updated 3 months ago
- Microbe-Metabolite INteractions-based metabolic profiles Predictor☆17Mar 17, 2023Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Ready-made Taxonomic Weights Repository☆25Mar 31, 2022Updated 4 years ago
- A comprehensive and customizable R package for microbiome analysis.☆24Sep 6, 2026Updated 2 months ago
- R package for searching, downloading and analysis of EBI MGnify metagenomics data☆23Oct 19, 2026Updated 2 weeks ago
- Materials for rstudio::conf 2019☆11Jan 12, 2019Updated 7 years ago
- R tools for integrating phylogenies and ecology☆43Aug 23, 2026Updated 2 months ago
- PHANTASM: PHylogenomic ANalyses for the TAxonomy and Systematics of Microbes☆26Dec 4, 2023Updated 2 years ago
- This is an ongoing project trying to quantify CH4 emissions from rivers in space and time.☆17Jun 7, 2024Updated 2 years ago
- A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations☆44Apr 4, 2023Updated 3 years ago
- R package for Statistical Inference of Associations between Microbial Communities And host phenoType☆60Sep 3, 2026Updated 2 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Scripts written for the "Finding Hidden Messages in DNA (Bioinformatics I)" course offered by UCSanDiego on Coursera.org☆11Apr 25, 2016Updated 10 years ago
- scripts for microbiome analysis☆12Jul 25, 2024Updated 2 years ago
- 🌈 Alluvial plot untangling☆33Sep 21, 2026Updated last month
- R package for microbial pangenomics☆25Apr 12, 2022Updated 4 years ago
- starfish: a modular toolkit for giant mobile element annotation☆44Dec 12, 2024Updated last year
- Scripts and documentations on the MCSC decontamination method☆10Jun 13, 2023Updated 3 years ago
- Latex thesis template for the University of Adelaide.☆21Oct 15, 2024Updated 2 years ago
- ☆12Sep 14, 2026Updated last month
- This repositiory serves as an auxiliary material to an awk course/seminar page.☆30Sep 1, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆16Mar 21, 2023Updated 3 years ago
- Normalized Stochasticity Ratio in community assembly☆31Oct 22, 2024Updated 2 years ago
- Various scripts used at the EnvGen group, directed towards metagenomic analysis.☆15Apr 28, 2020Updated 6 years ago
- Repository with NGSchool2022 materials☆14Sep 19, 2022Updated 4 years ago
- ☆14Sep 12, 2025Updated last year
- Contains the code and workflow for the bacterial strain definition paper with Kostas Kostantinidis☆14Dec 4, 2023Updated 2 years ago
- Classifiers trained on commonly used variable regions of Prokaryotic 16S rRNA genes☆18Jun 30, 2026Updated 4 months ago