NCBI-Hackathons / Structural_Variant_Comparison
SV
☆14Updated 6 years ago
Related projects ⓘ
Alternatives and complementary repositories for Structural_Variant_Comparison
- fast webservices based query tool for large sets of genomic features☆25Updated last year
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated 10 months ago
- Chromatin segmentation in R☆19Updated 6 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆33Updated 8 months ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- Prioritize structural variants based on CADD scores☆28Updated 4 years ago
- What's The Function of these genes?☆23Updated 7 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 3 months ago
- A tool for Read Multi-Mapper Resolution☆24Updated 7 years ago
- FermiKit small variant calls for public SGDP samples☆17Updated 8 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆20Updated 4 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated last year
- Q ChIP-seq peak caller☆18Updated 4 months ago
- ☆9Updated 8 years ago
- BigWig manpulation tools using libBigWig and htslib☆28Updated 3 months ago
- A curated list of awesome clonality and tumor heterogeneity resources☆15Updated 5 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆29Updated 3 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆41Updated 2 years ago
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated last year
- A tool to benchmark mappers and different parameters within minutes☆43Updated 5 years ago
- Enriched Domain Detector for ChIP-seq data☆16Updated 2 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 3 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 8 years ago
- A method to identify structural variation from sequencing data in target regions☆31Updated 4 years ago
- ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…☆19Updated 5 years ago
- Interpretable prioritization of splice variants in diagnostic next-generation sequencing☆15Updated 6 months ago
- User-friendly Bioinformatics Tools☆18Updated 3 years ago
- Personal diploid genome creation and coordinate conversion☆21Updated last month
- ☆23Updated 4 years ago