SV
☆15May 3, 2018Updated 8 years ago
Alternatives and similar repositories for Structural_Variant_Comparison
Users that are interested in Structural_Variant_Comparison are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A framework to annotate SVs with previous known SVs (vcf file) and or with genomic features (gff and or bed files)☆13Mar 12, 2018Updated 8 years ago
- Method to optimally select samples for validation and resequencing☆30Apr 6, 2021Updated 5 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Oct 31, 2019Updated 6 years ago
- Materials presented at the BiocNYC meet-up☆12Nov 29, 2018Updated 7 years ago
- Extracting disease-specific genomic coordinates from GWAS catalog☆21Nov 29, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Kdrew's scripts for handling protein complex map data☆14Jun 17, 2026Updated last month
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Oct 5, 2017Updated 8 years ago
- ☆13Apr 29, 2020Updated 6 years ago
- ☆18Mar 11, 2018Updated 8 years ago
- find likely coding segments in DNA using composition-normalised hexamer tables☆18Oct 18, 2024Updated last year
- a modified version of FunSeq2 using new data context☆15Aug 18, 2022Updated 3 years ago
- ☆14Jul 14, 2026Updated last week
- A framework for network analysis and display of SNPs☆20Oct 31, 2016Updated 9 years ago
- ☆21Dec 26, 2025Updated 6 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- detection of duplications and deletions using Python based machine learning techniques☆28Jul 22, 2019Updated 6 years ago
- ☆12Oct 13, 2021Updated 4 years ago
- A curated list of awesome clonality and tumor heterogeneity resources☆15Jun 25, 2019Updated 7 years ago
- dbVar☆41Updated this week
- cfDNA Sequencing Pipeline with UMI☆11Jun 11, 2026Updated last month
- Genomic trajectories (pseudotimes) in the presence of heterogenous environmental and genetic backgrounds☆12Mar 21, 2019Updated 7 years ago
- Framework to process and call somatic variation from NGS dataset generated using MSK-IMPACT assay☆14Mar 15, 2019Updated 7 years ago
- Zernike Optimized Localization Algorithm for 3D single molecule localizations☆19Sep 20, 2022Updated 3 years ago
- Genoppi: an open-source software for robust and standardized integration of proteomic and genetic data☆26May 15, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆19Apr 2, 2020Updated 6 years ago
- Convert structural variants to sequence graphs [ VCF + FASTA ---> GFA ]☆11Mar 6, 2024Updated 2 years ago
- ☆15Jun 3, 2019Updated 7 years ago
- Tutorials covering various topics in genomic data analysis.☆17Nov 29, 2018Updated 7 years ago
- 🐶 hlabud: HLA genotype analysis in R☆19Apr 11, 2025Updated last year
- Guide to transcriptome assembly & analysis☆21Apr 12, 2017Updated 9 years ago
- Chef cookbook to Manage Apache Solr☆20Jan 8, 2016Updated 10 years ago
- Morelia is a free, open-source Python API for Pinnacle Technology devices.☆11Updated this week
- Fast API server for calculating linkage disequilibrium☆20Apr 24, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Compute mean telomere length from Whole Genome Sequencing data.☆15Feb 15, 2024Updated 2 years ago
- ☆20Nov 30, 2023Updated 2 years ago
- This repository contains the source code of the revised version of MutPanning. MutPanning is publicly available under the BSD3-Clause ope…☆14Nov 12, 2019Updated 6 years ago
- Web application for Rxivist, the site that makes it easier to find the most talked-about papers on bioRxiv.org☆10Mar 1, 2023Updated 3 years ago
- Detecting cancer subtypes with machine learning.☆10Feb 5, 2020Updated 6 years ago
- SNV expectation maximisation based mutation calling algorithm aimed at detecting somatic mutations in paired (tumour/normal) cancer sampl…☆85Apr 24, 2025Updated last year
- Kipoi's model zoo API☆243Dec 17, 2025Updated 7 months ago