PMBio / limixLinks
We have moved to https://github.com/limix/limix.
☆24Updated 7 years ago
Alternatives and similar repositories for limix
Users that are interested in limix are comparing it to the libraries listed below
Sorting:
- RSS: Regression with Summary Statistics☆50Updated 10 months ago
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Updated 6 years ago
- An R package for detecting Gene-by-Environment (GxE) interaction effects on the transcriptome using Allele Specific Expression quantified…☆21Updated 3 years ago
- ☆21Updated 8 years ago
- Code and simulations using biologically annotated neural networks☆21Updated 3 years ago
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆23Updated 5 years ago
- Various Ideas for Confounder Adjustment in Regression☆24Updated 2 years ago
- This repository is retired software☆13Updated 9 years ago
- Use gene expression to predict phenotype sample information☆19Updated 7 years ago
- Modelling DNA methylation profiles☆23Updated 5 years ago
- polygenic scores using variational inference on GWAS summary statistics from multiple cohorts☆11Updated 2 years ago
- Citrus Development Code☆31Updated last year
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆26Updated 8 years ago
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Updated 7 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- TeraStructure is a new algorithm to fit Bayesian models of genetic variation in human populations on tera-sample-sized data sets (10^12 o…☆49Updated 5 years ago
- XL-mHG: A Semiparametric Test for Enrichment in Ranked Lists.☆14Updated 2 years ago
- Code for the paper "A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes"☆19Updated 5 years ago
- Deep Feature Interaction Maps (DFIM)☆53Updated 6 years ago
- Archived version of RUVSeq☆8Updated 8 years ago
- easy access to benchmark datasets☆50Updated 6 years ago
- Concise: Keras extension for regulatory genomics☆35Updated 2 years ago
- Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq☆48Updated 6 years ago
- countsimQC - Compare characteristic features of count data sets☆28Updated 3 weeks ago
- Repository for the Epigenomics Tutorial hold at ISMB 2017 in Prague☆14Updated 4 years ago
- Code for performing PCA followed by CCA☆18Updated 6 years ago
- ☆11Updated 8 years ago
- Mitigating the adverse impact of batch effects in sample pattern detection☆9Updated 5 years ago
- tGPLVM: A Nonparametric, Generative Model for Manifold Learning with scRNA-seq experimental data☆17Updated 6 years ago
- ☆12Updated last year