☆21Jul 4, 2017Updated 8 years ago
Alternatives and similar repositories for GPfates
Users that are interested in GPfates are comparing it to the libraries listed below
Sorting:
- Probabilistic pseudotime for single-cell RNA-seq data☆10Oct 6, 2017Updated 8 years ago
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Oct 5, 2017Updated 8 years ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Oct 15, 2020Updated 5 years ago
- We have moved to https://github.com/limix/limix.☆23Aug 29, 2017Updated 8 years ago
- ☆55Feb 19, 2025Updated last year
- Hera-T, a fast and accurate tool for estimating gene abundances in single cell data generated by the 10X-Chromium protocol☆18Nov 9, 2021Updated 4 years ago
- A simple, intuitive and Efficient single cell binary Data Storage format☆15Oct 10, 2019Updated 6 years ago
- ☆29Feb 1, 2023Updated 3 years ago
- R package to identify genes with differential distributions in single-cell RNA-seq☆34Mar 24, 2022Updated 3 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Jun 29, 2022Updated 3 years ago
- Store collections of experimental data based on TileDB☆12Feb 16, 2026Updated last week
- False discovery rate regression☆10Nov 12, 2020Updated 5 years ago
- Variational Auto Encoders for learning binding signatures of transcription factors☆14Mar 14, 2024Updated last year
- scLVM is a modelling framework for single-cell RNA-seq data that can be used to dissect the observed heterogeneity into different sources…☆110Dec 16, 2022Updated 3 years ago
- Inference of switch-like differential expression along single-cell trajectories☆22Oct 24, 2017Updated 8 years ago
- What's The Function of these genes?☆22Mar 17, 2017Updated 8 years ago
- A flexible python program for generating figures from regions of the genome.☆13Apr 6, 2019Updated 6 years ago
- SCOUP is a probabilistic model to analyze single-cell expression data during differentiation☆10Apr 20, 2017Updated 8 years ago
- ☆10Oct 30, 2018Updated 7 years ago
- ☆12Jul 13, 2018Updated 7 years ago
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.☆12Mar 9, 2021Updated 4 years ago
- Digital Database of Microbial Phenotypes. Like an online Bergey's Manual.☆13Mar 1, 2012Updated 13 years ago
- Denoising Autoencoders for Phenotype Stratification☆42Nov 9, 2018Updated 7 years ago
- The JunctionSeq R package is a powerful tool for testing and visualizing differential usage of exons and splice junctions in next-generat…☆29May 19, 2017Updated 8 years ago
- netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation☆28May 15, 2024Updated last year
- Building SuperTranscripts: A linear representation of transcriptome data☆68Mar 22, 2021Updated 4 years ago
- Mean Alterations Using Discrete Expression☆14Apr 9, 2024Updated last year
- Integrative visualization of multiple omic datasets onto KEGG pathways.☆11Oct 4, 2021Updated 4 years ago
- Software for error-tolerant coding of information into DNA sequences using finite-state transducers.☆12Jan 8, 2017Updated 9 years ago
- command-line and python interface to the uniprot database☆10Jun 11, 2015Updated 10 years ago
- R scripts and tutorial datasets to detect conditionally rare taxa in time series of microbial communities☆20Jul 14, 2020Updated 5 years ago
- Material for lecture at the EMBL Single Cell Course 2016☆47Apr 7, 2016Updated 9 years ago
- Software for exploration of gene expression data from single-cell RNA sequencing.☆28Jun 20, 2019Updated 6 years ago
- Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave☆45Mar 13, 2024Updated last year
- Biological Graphic tool in Python☆34May 14, 2020Updated 5 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆32Aug 1, 2024Updated last year
- A JBrowse plugin for creating sashimi or junction style plots from RNA-seq data☆14Apr 30, 2021Updated 4 years ago
- Issues and pull requests for BiocStyle should go here.☆14Oct 30, 2025Updated 4 months ago
- A Python interface to the Ensembl REST APIs, biological data at your fingertips.☆11Apr 17, 2024Updated last year