Alternatives and similar repositories for dap

Users that are interested in dap are comparing it to the libraries listed below

• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆53Updated last week
• xqwen / integrative
  Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization
  ☆25Updated 5 years ago
• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆26Updated 3 years ago
• xqwen / torus
  QTL Discovery using Annotations
  ☆25Updated 2 years ago
• ajaynadig / bhr
  Suite of heritability and genetic correlation estimation tools for exome-sequencing data
  ☆34Updated 4 months ago
• thewonlab / H-MAGMA
  ☆33Updated 2 years ago
• slowkow / proxysnps
  Get SNP proxies from the 1000 Genomes Project.
  ☆28Updated 6 years ago
• karltayeb / cafeh
  ☆13Updated 2 years ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆45Updated last year
• hakyimlab / gtex-gwas-analysis
  ☆23Updated 3 years ago
• MRCIEU / PhenoSpD
  ☆18Updated 7 years ago
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆32Updated 4 years ago
• clagiamba / moloc
  ☆35Updated 4 years ago
• immunogenomics / IMPACT
  Code for creating cell-type-specific regulatory element annotation files
  ☆18Updated last year
• RebeccaFine / benchmarker
  Benchmarking gene and variant prioritization algorithms for GWAS data
  ☆15Updated 5 years ago
• zhouhufeng / FAVORannotator
  ☆20Updated 2 years ago
• xihaoli / MetaSTAAR
  An R package for performing MetaSTAAR procedure in whole-genome sequencing studies
  ☆23Updated 7 months ago
• Jeremy37 / AD_finemap
  Code supporting analyses in paper on fine-mapping AD loci
  ☆15Updated 3 years ago
• eQTL-Catalogue / eQTL-Catalogue-resources
  ☆48Updated last month
• RajLabMSSM / ggLocusZoom
  Create LocusZoom-style plots in R.
  ☆22Updated 2 years ago
• sb452 / mr-code
  Code for implementing Mendelian randomization investigations
  ☆17Updated 9 years ago
• natsuhiko / rasqual
  Robust Allele Specific Quantification and quality controL
  ☆39Updated 3 years ago
• hall-lab / gtex
  GTEx analysis scripts
  ☆20Updated 8 years ago
• anastasia-lucas / hudson
  An R package for creating mirrored Manhattan plots
  ☆18Updated 2 years ago
• Genentech / midasHLA
  R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…
  ☆12Updated last year
• yiminghu / post-GWAS-pipeline
  A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data
  ☆29Updated 2 years ago
• statgen / swiss
  Software to help identify overlap between association scan results and GWAS hit catalogs.
  ☆15Updated 2 years ago
• dan-landau / IronThrone-GoT
  processes GoT amplicon data and generates a table of metrics
  ☆30Updated 3 years ago
• joepickrell / fgwas
  Functional genomics and genome-wide association studies
  ☆67Updated 6 years ago
• ilarsf / gwasTools
  Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)
  ☆31Updated 3 weeks ago