xqwen / dapLinks
software package for integrative genetic association analysis
☆34Updated 2 years ago
Alternatives and similar repositories for dap
Users that are interested in dap are comparing it to the libraries listed below
Sorting:
- Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization☆25Updated 5 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆45Updated last year
- Colocalization analysis of genetic association signals☆52Updated last month
- Functional genomics and genome-wide association studies☆67Updated 6 years ago
- QTL Discovery using Annotations☆25Updated 2 years ago
- Mediated Expression Score Regression (MESC)☆26Updated 3 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 11 months ago
- ☆33Updated 2 years ago
- ☆13Updated 2 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆33Updated 4 years ago
- ☆21Updated 3 months ago
- Code for implementing Mendelian randomization investigations☆18Updated 9 years ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆40Updated 7 months ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated 2 years ago
- GTEx analysis scripts☆20Updated 8 years ago
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆11Updated 6 years ago
- causal TWAS (cTWAS)☆44Updated last week
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 3 years ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated last year
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆53Updated last month
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- GWAS gold standards repository☆37Updated last year
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 5 years ago
- Repository for resources we'd like to share with the community.☆24Updated 3 years ago
- processes GoT amplicon data and generates a table of metrics☆30Updated 3 years ago
- Estimate genetic correlation using predicted expression☆22Updated 7 years ago
- Convert GWAS summary statistics to VCF☆48Updated 2 years ago
- A collection of modules to process and analyze IMGT-HLA sequences.☆29Updated 2 years ago
- Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …☆26Updated 2 years ago
- Get SNP proxies from the 1000 Genomes Project.☆28Updated 6 years ago