Alternatives and similar repositories for ggideogram

Users that are interested in ggideogram are comparing it to the libraries listed below

• YaoLab-Bioinfo / shinyChromosome
  an R/Shiny application for interactive creation of non-circular plots of whole genomes
  ☆45Updated 4 months ago
• shuliliu / cattleGTEx
  The cattle Genotype-Tissue Expression atlas v1
  ☆27Updated 2 years ago
• sunyumail93 / PipeRNAseq
  A comprehensive pipeline for RNAseq data analysis
  ☆22Updated last year
• frankgenome / DataColor
  DataColor: Unveiling Biological Data Relationships through Distinctive Color Mapping
  ☆15Updated last year
• plantformatics / Socrates
  ☆21Updated 7 months ago
• sanjaynagi / rna-seq-pop
  Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
  ☆18Updated 6 months ago
• junjunlab / BioSeqUtils
  Extract Sequence from Genome According to Annotation File
  ☆38Updated 5 months ago
• johanzi / gwas_gemma
  Perform GWAS with gemma in a simple pipeline
  ☆27Updated 5 months ago
• sguizard / DensityMap
  DensityMap is perl tool for the visualization of features density along chromosomes
  ☆19Updated 3 years ago
• LappalainenLab / lorals_paper_code
  ☆27Updated 3 years ago
• JBerthelier / ParasiTE
  Invertory of TE-gene isoforms
  ☆13Updated 2 years ago
• marieBvr / TEs_genes_relationship_pipeline
  Distribution of TEs and their relationship to genes in host genome
  ☆23Updated 2 years ago
• XiDsLab / TAGET
  ☆20Updated 3 years ago
• mortazavilab / cerberus
  ☆19Updated last year
• YaoLab-Bioinfo / binQTL
  QTL mapping with binmap data
  ☆18Updated 6 years ago
• RitataLU / ATACgraph
  ☆15Updated 2 years ago
• hewm2008 / LDBlockShow
  LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files
  ☆33Updated 3 months ago
• guokai8 / CandiHap
  Build haplotye and generate figures
  ☆18Updated 3 years ago
• ma-compbio / Phylo-HMRF
  ☆17Updated 4 years ago
• kcakdemir / HiCPlotter
  “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau
  ☆19Updated 5 years ago
• jkimlab / msPIPE
  ☆19Updated 2 years ago
• liangfan01 / pipeline-for-isoseq
  ☆14Updated 7 years ago
• caulilin / QTG_Seq
  ☆22Updated 6 years ago
• junjunlab / GetTransTool
  Extract longest transcript or longest CDS transcript from GTF annotation file or gencode transcripts fasta file.
  ☆20Updated 3 years ago
• a-velt / Mfuzz_RNAseq
  A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.
  ☆22Updated 6 years ago
• hanlinqian / IntegrativeNetworkMap
  ☆24Updated 2 years ago
• jaredgk / PPP
  Repository for pipeline code
  ☆26Updated last year
• xuzhougeng / wgap
  Whole Genome Annotation Pipeline
  ☆16Updated 3 months ago
• junjunlab / ggChIPvis
  Profile and Heatmap Visualization by Using ggplot2 and grid
  ☆10Updated last year
• adhikari-statgen-lab / fastman
  An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.
  ☆39Updated last week