schneebergerlab / GameteBinning_tetraploid
This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings
☆12Updated 3 years ago
Alternatives and similar repositories for GameteBinning_tetraploid:
Users that are interested in GameteBinning_tetraploid are comparing it to the libraries listed below
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- Construct and Analyze the North American Vitis pangenome☆22Updated last year
- ☆16Updated 3 years ago
- ☆24Updated last year
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆24Updated last week
- Scripts to do haplotype analysis on pan genomes.☆21Updated 4 years ago
- Tools for haplotype-wise reconstruction of pseudomolecules☆20Updated 5 months ago
- Yet another Hi-C scaffolding tool☆19Updated 5 months ago
- building a human pangenome from the HPRCy1v2 genbank accessioned assemblies☆14Updated 2 years ago
- Script to help assessing the evolutionary history of a TE family☆16Updated 5 years ago
- Long Read Based SV Calling Tools Analysis☆13Updated last year
- ☆14Updated last year
- Integrate multiple genome assemblies into a pangenome graph☆33Updated 2 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆25Updated 3 years ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆25Updated 4 years ago