schneebergerlab / GameteBinning_tetraploidLinks
This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings
☆12Updated 3 years ago
Alternatives and similar repositories for GameteBinning_tetraploid
Users that are interested in GameteBinning_tetraploid are comparing it to the libraries listed below
Sorting:
- building a human pangenome from the HPRCy1v2 genbank accessioned assemblies☆14Updated 2 years ago
- Scripts to do haplotype analysis on pan genomes.☆21Updated 4 years ago
- ☆25Updated 2 years ago
- Study of TE evolution in a population of genomes☆9Updated last year
- ☆15Updated last year
- Long Read Based SV Calling Tools Analysis☆14Updated last year
- ☆22Updated last year
- ☆15Updated last year
- A module for improving the insertion sequences of structural variant calls☆30Updated 4 years ago
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- ☆42Updated last year
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆17Updated 6 years ago
- Tools for haplotype-wise reconstruction of pseudomolecules☆20Updated 9 months ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆25Updated 4 years ago
- Method to optimally select samples for validation and resequencing☆28Updated 4 years ago
- HiC-Hiker: A probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C☆26Updated 4 years ago
- MODAS: Multi-Omics Data Association Study toolkit☆21Updated 7 months ago
- Identification of transposable element insertion polymorphisms (TIPs) based on a pan-genome and large-scale resequencing data☆13Updated 3 years ago
- ☆14Updated 3 years ago
- This is the Haplotypo repository☆20Updated last year
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆24Updated 3 years ago
- ☆15Updated 5 years ago
- Yet another Hi-C scaffolding tool☆21Updated 8 months ago
- Whole Genome Annotation Pipeline☆17Updated 3 weeks ago
- Integrate multiple genome assemblies into a pangenome graph☆34Updated 3 years ago
- Construct and Analyze the North American Vitis pangenome☆23Updated last year
- A Hi-C scaffolding method☆23Updated 3 years ago
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆21Updated 4 years ago
- ☆15Updated 3 years ago
- Phylogenetic Analysis of Long Terminal Repeat Retrotransposons☆17Updated 2 years ago