schneebergerlab / GameteBinning_tetraploid

Related projects ⓘ

Alternatives and complementary repositories for GameteBinning_tetraploid

• Uauy-Lab / pangenome-haplotypes
  Scripts to do haplotype analysis on pan genomes.
  ☆21Updated 4 years ago
• LAILAB-CAU / update-Mo17
  ☆22Updated last year
• yilinZhang-bio / Watermelon-pangenome
  ☆20Updated last year
• pangenome / HPRCyear1v2genbank
  building a human pangenome from the HPRCy1v2 genbank accessioned assemblies
  ☆14Updated last year
• maiziezhoulab / LRSV_combo
  Long Read Based SV Calling Tools Analysis
  ☆11Updated 8 months ago
• weigelworld / pan-nlrome
  The GitHub repository for the A. thaliana pan-NLR'ome project.
  ☆16Updated 5 years ago
• andreaminio / HaploSync
  Tools for haplotype-wise reconstruction of pseudomolecules
  ☆20Updated last month
• wheatgenetics / owwc
  repository for code used in analysis of open wild wheat consortium
  ☆15Updated 2 years ago
• wtsi-hpag / scanPAV
  Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.
  ☆29Updated 6 years ago
• glogsdon1 / sunk-based_assembly
  ☆15Updated 3 years ago
• noecochetel / North_American_Vitis_Pangenome
  Construct and Analyze the North American Vitis pangenome
  ☆21Updated 11 months ago
• ksiewert / BetaScan
  Genome-wide scan for balancing selection using beta statistic
  ☆27Updated last year
• dfguan / pin_hic
  A Hi-C scaffolding method
  ☆22Updated 2 years ago
• baozg / assembly-annotation-pipeline
  Plant genome assembly and annotation pipeline using snakemake
  ☆35Updated last year
• zlguu / Rice_Heterosis
  ☆14Updated last year
• yiliao1022 / LASTZ_SV_pipeline
  ☆16Updated 4 years ago
• GaoLei-bio / SV
  ☆14Updated 2 years ago
• evotools / CattleGraphGenomePaper
  Set of script for the paper on the cattle graph genome
  ☆13Updated last year
• caasivfbioinfo / Bol_pangenome
  ☆14Updated 11 months ago
• jmsong2 / GenomeSyn
  We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …
  ☆23Updated 2 years ago
• bioinformatics-ptp / detectRUNS
  detectRuns: a R Package for Runs of Homozygosity and Runs of Heterozygosity
  ☆8Updated last year
• mkirsche / Iris
  A module for improving the insertion sequences of structural variant calls
  ☆29Updated 3 years ago
• YaoZhou89 / WGSc
  ☆16Updated 2 years ago
• LeanQ / SPLITREADER
  Split-read pipeline for the identification of non-reference TE insertions with TSDs
  ☆24Updated 4 years ago
• Atvar2 / plotHicGenome
  The tools are used for displaying hic signal of genome
  ☆22Updated 3 years ago
• malonge / CallSV
  A long-read SV calling pipeline
  ☆11Updated 3 years ago
• dawelab / Ab10-Assembly
  B73Ab10 genome assembly methods
  ☆16Updated 2 years ago
• fritzsedlazeck / SVCollector
  Method to optimally select samples for validation and resequencing
  ☆26Updated 3 years ago
• yangli557 / AnnoSINE
  SINE annotation tool for plant genomes
  ☆18Updated 10 months ago
• biozzq / goat-population-genetic
  Main scripts and commands used to analyze goat population genetic and domestication
  ☆17Updated 5 years ago