DovetailGenomics / HiRise_July2015_GRLinks
test repository
☆29Updated 2 years ago
Alternatives and similar repositories for HiRise_July2015_GR
Users that are interested in HiRise_July2015_GR are comparing it to the libraries listed below
Sorting:
- ☆78Updated 5 years ago
- TGS scaffolding☆47Updated 4 years ago
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- A battery of methylation tools for PacBio HiFi reads☆48Updated 2 months ago
- Segmental Duplication Assembler (SDA).☆43Updated 2 years ago
- Create a pseudohaploid assembly from a partially resolved diploid assembly☆32Updated 6 years ago
- ☆32Updated last year
- use long sequenced reads to close gaps in assemblies☆40Updated 7 years ago
- Copy number variant caller and depth visualization utility for PacBio HiFi reads☆47Updated last year
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆47Updated 4 years ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆36Updated 3 years ago
- A program for assessing the T2T genome continuity☆92Updated last month
- ☆44Updated last year
- Show pangenome graphs in an easy way☆58Updated 6 months ago
- Code for phasing SVs with SNPs☆54Updated 5 years ago
- ☆45Updated 9 years ago
- Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆59Updated 5 months ago
- Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…☆37Updated last year
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated last year
- ☆68Updated last week
- A fast tool for detecting and decomposing segmental duplications in genome assemblies☆55Updated 6 months ago
- Tools for improving the sensitivity and specificity of genome alignments☆58Updated 2 years ago
- MarginPolish: Graph based assembly polishing☆47Updated 5 years ago
- finshingTool☆54Updated 9 years ago
- Call select base modifications in PacBio HiFi reads☆15Updated 3 months ago
- An easy way to run BioNano genomic analysis☆28Updated 4 years ago
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆69Updated 4 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆60Updated 2 years ago
- Structural variant caller for real-time long-read sequencing data☆61Updated 3 years ago
- A tool for evaluate long-read de novo assembly results☆48Updated last year