DovetailGenomics / HiRise_July2015_GRLinks
test repository
☆29Updated 2 years ago
Alternatives and similar repositories for HiRise_July2015_GR
Users that are interested in HiRise_July2015_GR are comparing it to the libraries listed below
Sorting:
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- TGS scaffolding☆47Updated 4 years ago
- Create a pseudohaploid assembly from a partially resolved diploid assembly☆32Updated 5 years ago
- Plant genome assembly and annotation pipeline using snakemake☆48Updated 6 months ago
- Show pangenome graphs in an easy way☆56Updated 3 months ago
- ☆43Updated last year
- Integrate multiple genome assemblies into a pangenome graph☆35Updated 3 years ago
- ☆78Updated 5 years ago
- ☆45Updated 8 years ago
- ☆31Updated 5 years ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆34Updated 3 years ago
- Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆58Updated 2 months ago
- This toolkit deals with GEnomic sequence and genome structure ANnotation files between inbreeding lines and species.☆45Updated 2 years ago
- A tool for evaluating long-read de novo assembly results☆48Updated last year
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- C-Phasing/CPhasing: Phasing and scaffolding polyploid genomes based on Pore-C, HiFi-C/CiFi or Hi-C.☆71Updated 4 months ago
- ☆31Updated 10 months ago
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated 10 months ago
- ☆33Updated 4 years ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆47Updated 4 years ago
- TSEBRA: Transcript Selector for BRAKER☆48Updated this week
- A tool for evaluate long-read de novo assembly results☆48Updated last year
- A Nextflow workflow to generate lift over files for any pair of genomes☆69Updated 5 months ago
- Draw a dot plot from a paf alignment☆35Updated 2 months ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- source code of the paper "RepLong - de novo repeat discovery from long reads"☆18Updated 10 months ago
- A battery of methylation tools for PacBio HiFi reads☆43Updated last week
- Custom tools to 'facilitate' BioNano Genomics data analysis☆34Updated 7 years ago
- BITACORA: A Bioinformatics tool for gene family annotation☆49Updated 5 months ago
- Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…☆34Updated last year