RabbitBio / RabbitQCPlusLinks
A more efficient quality control tool for sequencing data
☆31Updated 6 months ago
Alternatives and similar repositories for RabbitQCPlus
Users that are interested in RabbitQCPlus are comparing it to the libraries listed below
Sorting:
- Differential k-mer analysis☆38Updated last year
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 7 months ago
- recompute GFA link overlaps☆25Updated 3 years ago
- Profile HMM-based hybrid error correction algorithm for long reads☆21Updated 7 years ago
- Kmer Analysis of Pileups for Genotyping☆34Updated this week
- Correcting errors in noisy long reads using variation graphs☆50Updated 3 years ago
- URMAP ultra-fast read mapper☆38Updated 5 years ago
- An Fast variant calling tool to detection germline and somatic variants☆11Updated 2 years ago
- K-mer substring space decomposition☆44Updated 3 months ago
- ☆18Updated last year
- Improved Phased Assembler☆28Updated 3 years ago
- interactive Multi Objective K-mer Analysis☆23Updated 2 years ago
- RabbitMash: an efficient highly optimized implementation of Mash.☆20Updated 2 years ago
- Tool for decomposition centromeric assemblies and long reads into monomers☆36Updated 3 years ago
- An algorithm for centromere assembly using long error-prone reads☆25Updated 4 years ago
- ☆28Updated last year
- ☆21Updated 9 months ago
- ☆28Updated last year
- Long-read aligner to pangenome graphs☆28Updated last year
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- MONI: A Pangenomic Index for Finding MEMs☆37Updated 8 months ago
- base-accurate DNA sequence alignments using edlib and mashmap2☆32Updated 4 years ago
- A tool for recovering synteny blocks from multiple alignment☆32Updated 4 years ago
- Identification of segmental duplications in the genome☆27Updated 3 years ago
- ♥ Fast and Accurate Estimation of Evolutionary Distances☆29Updated 7 months ago
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆46Updated 3 months ago
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆52Updated 9 months ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- BlockPolish: accurate polishing of long-read assembly via block divide-and-conquer☆17Updated 2 years ago
- R package and wrapper functions for identifying serial structural variations from genome assemblies☆27Updated last year